Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   KJP47_RS07820 Genome accession   NZ_OX419577
Coordinates   1495112..1495696 (+) Length   194 a.a.
NCBI ID   WP_014113628.1    Uniprot ID   A0A0D1L215
Organism   Bacillus subtilis isolate NRS6120     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1490112..1500696
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KJP47_RS07790 (NRS6120_08225) dapD 1490298..1491008 (+) 711 WP_003218680.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  KJP47_RS07795 (NRS6120_08230) dapI 1491078..1492202 (+) 1125 WP_014476668.1 N-acetyldiaminopimelate deacetylase -
  KJP47_RS07800 (NRS6120_08235) ykuS 1492264..1492509 (+) 246 WP_003232382.1 YkuS family protein -
  KJP47_RS07805 (NRS6120_08240) mscT 1492547..1493350 (-) 804 WP_003244994.1 small-conductance mechanosensitive channel protein MscT -
  KJP47_RS07810 (NRS6120_08245) ahpA 1493587..1494129 (+) 543 WP_041334143.1 biofilm-specific peroxidase AhpA -
  KJP47_RS07815 (NRS6120_08250) ykuV 1494200..1494646 (+) 447 WP_213383827.1 TlpA disulfide reductase family protein -
  KJP47_RS07820 (NRS6120_08255) rok 1495112..1495696 (+) 585 WP_014113628.1 transcriptional regulator Rok Regulator
  KJP47_RS07830 (NRS6120_08275) cse15 1497027..1497992 (-) 966 WP_041055908.1 spore protein Cse15 -
  KJP47_RS07835 (NRS6120_08280) mobA 1498129..1498728 (+) 600 WP_041055905.1 molybdenum cofactor guanylyltransferase -
  KJP47_RS07840 (NRS6120_08285) moeB 1498779..1499798 (+) 1020 WP_213384149.1 molybdopterin-synthase adenylyltransferase MoeB -

Sequence

Protein


Download         Length: 194 a.a.        Molecular weight: 22127.12 Da        Isoelectric Point: 9.7036

>NTDB_id=1157738 KJP47_RS07820 WP_014113628.1 1495112..1495696(+) (rok) [Bacillus subtilis isolate NRS6120]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDRNGSPSEIKKDFRSEKKPDSLPVLAELAAQEIRSYQPQS
QQQSVQPQLQSISSLPAGIPDGTTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFMQ
SLIKMYPEVKKPYRGQYILEGEIESAESAESANE

Nucleotide


Download         Length: 585 bp        

>NTDB_id=1157738 KJP47_RS07820 WP_014113628.1 1495112..1495696(+) (rok) [Bacillus subtilis isolate NRS6120]
ATGTTTAATGAAAGAGAAGCTTTGCGCTTGCGGTTAGAACAATTAAATGAAGCTGAAGTGAAAGTCATTCGTGAATATCA
AATTGAACGTGATAAAATATACGCAAAATTAAGAGAGCTGGACAGAAATGGAAGCCCTTCCGAAATCAAAAAGGATTTCC
GTTCTGAAAAAAAACCTGACTCTCTGCCGGTTCTCGCTGAGCTTGCGGCTCAGGAAATCAGAAGCTATCAGCCGCAATCA
CAGCAGCAGTCTGTTCAGCCTCAGCTTCAATCTATTTCCTCTCTTCCTGCCGGTATACCAGACGGAACAACACGAAGAAG
AAGAGGAACGGCTAGACCGGGATCAAAAGCAGCTAAGCTGCGTGAAGCTGCTATTAAAACATTAAAACGCCACAACGCGG
CGATTAAGAGCTCGGAGCTTCAAAAAGAGATTGAAAAAGAAAGCGGTCTTGAAATCCCTAATATGACAACGTTTATGCAA
AGCTTAATTAAAATGTACCCGGAAGTGAAAAAACCATATCGCGGGCAGTACATTTTAGAGGGTGAAATCGAATCTGCAGA
ATCAGCTGAATCAGCTAATGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

100

97.423

0.974

Multiple sequence alignment