Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   KJP47_RS07705 Genome accession   NZ_OX419577
Coordinates   1476122..1476586 (-) Length   154 a.a.
NCBI ID   WP_003232406.1    Uniprot ID   G4NVM0
Organism   Bacillus subtilis isolate NRS6120     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1471122..1481586
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KJP47_RS07685 (NRS6120_08125) kinA 1471589..1473409 (+) 1821 WP_014476652.1 sporulation histidine kinase KinA -
  KJP47_RS07690 (NRS6120_08130) dapX 1473419..1474600 (-) 1182 WP_210216464.1 aminotransferase A -
  KJP47_RS07695 (NRS6120_08135) - 1474802..1474963 (-) 162 WP_003245246.1 hypothetical protein -
  KJP47_RS07700 (NRS6120_08140) cheV 1475167..1476078 (+) 912 WP_041054806.1 chemotaxis protein CheV -
  KJP47_RS07705 (NRS6120_08145) kre 1476122..1476586 (-) 465 WP_003232406.1 YkyB family protein Regulator
  KJP47_RS07710 (NRS6120_08150) ykuC 1476712..1478004 (-) 1293 WP_213383819.1 MFS transporter -
  KJP47_RS07715 - 1478080..1478371 (-) 292 Protein_1459 LysM peptidoglycan-binding domain-containing protein -
  KJP47_RS07720 (NRS6120_08155) ppeE 1478428..1479288 (-) 861 WP_003232400.1 metallophosphoesterase -
  KJP47_RS07725 (NRS6120_08160) fadH 1479431..1480195 (+) 765 WP_213383820.1 2,4-dienoyl-CoA reductase -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17895.71 Da        Isoelectric Point: 10.3545

>NTDB_id=1157737 KJP47_RS07705 WP_003232406.1 1476122..1476586(-) (kre) [Bacillus subtilis isolate NRS6120]
MDDHAYTKDLQPTVENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSKNPRFSQQQSDVLISIGD
YYFHMPPTKEDFEHLPHLGTLNQSYRNPKAQMSLTKAKHLLQEYVGMKEKPLVPNRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=1157737 KJP47_RS07705 WP_003232406.1 1476122..1476586(-) (kre) [Bacillus subtilis isolate NRS6120]
ATGGACGACCATGCATATACGAAAGATCTGCAGCCAACCGTAGAAAATCTTTCAAAAGCAGTTTACACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTATATCTGCTGAAAAAACGGGCTTTGCAAAAGCTTGTCAAAGAAGGTAAAG
GAAAGAAAATAGGGCTTCATTTTTCAAAAAATCCAAGGTTCAGTCAACAGCAATCGGACGTGCTTATCTCTATCGGAGAC
TACTATTTTCACATGCCTCCAACTAAAGAAGACTTCGAACATCTTCCGCATTTAGGTACACTTAATCAATCGTACCGAAA
TCCTAAAGCTCAAATGTCTTTAACAAAAGCGAAACACCTATTGCAAGAATATGTCGGCATGAAAGAAAAGCCGCTAGTGC
CAAATCGCCAGCAGCCAGCTTACCATAAACCGGTCTTTAAAAAACTTGGCGAGAGTTACTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(14-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NVM0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment