Detailed information NTG1157729

Bioinformatically predicted

Overview

• Name: med
• Type: Regulator
• Locus tag: KJP47_RS06170
• Genome accession: NZ_OX419577
• Coordinates: 1199101..1200054 (+)
• Length: 317 a.a.
• NCBI ID: WP_041351863.1
• Uniprot ID: -
• Organism: Bacillus subtilis isolate NRS6120
• Function: regulation of regulators (predicted from homology) Competence regulation

Genomic Context

Location: 1194101..1205054

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KJP47_RS06145 (NRS6120_06500)	argF	1195933..1196892 (+)	960	WP_213383831.1	ornithine carbamoyltransferase	-
KJP47_RS06150 (NRS6120_06505)	yjzC	1196977..1197156 (+)	180	WP_003245356.1	YjzC family protein	-
KJP47_RS06155 (NRS6120_06510)	yjzD	1197203..1197388 (-)	186	WP_003245236.1	DUF2929 domain-containing protein	-
KJP47_RS06160 (NRS6120_06515)	-	1197637..1198371 (+)	735	WP_041340422.1	hypothetical protein	-
KJP47_RS06165 (NRS6120_06520)	-	1198453..1199010 (+)	558	WP_213383830.1	hypothetical protein	-
KJP47_RS06170 (NRS6120_06525)	med	1199101..1200054 (+)	954	WP_041351863.1	transcriptional regulator Med	Regulator
KJP47_RS06175 (NRS6120_06530)	comZ	1200069..1200260 (+)	192	WP_003224559.1	ComG operon transcriptional repressor ComZ	Regulator
KJP47_RS06180 (NRS6120_06535)	yjzB	1200290..1200517 (-)	228	WP_121591633.1	spore coat protein YjzB	-
KJP47_RS06185 (NRS6120_06540)	fabH	1200682..1201620 (+)	939	WP_041340412.1	beta-ketoacyl-ACP synthase III	-
KJP47_RS06190 (NRS6120_06545)	fabF	1201643..1202884 (+)	1242	WP_003244890.1	beta-ketoacyl-ACP synthase II	-
KJP47_RS06195 (NRS6120_06550)	yjaZ	1202960..1203745 (+)	786	WP_144453483.1	DUF2268 domain-containing protein	-
KJP47_RS06200 (NRS6120_06555)	appD	1203939..1204925 (+)	987	WP_003232965.1	oligopeptide ABC transporter ATP-binding protein AppD	-

Sequence

Protein

• Length: 317 a.a.
• Molecular weight: 35296.81 Da
• Isoelectric Point: 4.6031

>NTDB_id=1157729 KJP47_RS06170 WP_041351863.1 1199101..1200054(+) (med) [Bacillus subtilis isolate NRS6120]
MITRLVMIFSVLLLLSGCGQTPFKGKIEKVGMLFPDTINDLVWGTKGYKGLLNIQSKYNVDVYYKEGVKTEEDIVNAIED
FHKRGVNLLYGHGSEYAEVFNLVGEDYPDMEFVISNAKAKADNVTSVHFSGEAMGFFGGMTAAHMSKTNQVGVIASFTWQ
PEVDGFIKGAKYENPDIEVNTKYTDHWDDDTTAVKLYQKMKNEGADVVYPAGDGYNVPVIQQIKKDGLYAIGYVTDQSDL
GENTVLTSTVQNVDKAYEIIAEQFNKGTLEGGDHYYDLNTGVVEMGTFSPLVDKDFQQRIAKLIKTYNKTGELPKNE

Nucleotide

• Length: 954 bp

>NTDB_id=1157729 KJP47_RS06170 WP_041351863.1 1199101..1200054(+) (med) [Bacillus subtilis isolate NRS6120]
TTGATCACAAGGCTTGTCATGATCTTTTCTGTCCTCCTTTTATTGAGTGGATGTGGACAAACTCCGTTCAAAGGAAAAAT
TGAGAAGGTCGGCATGCTCTTTCCTGATACGATTAATGACCTCGTATGGGGCACAAAAGGGTATAAAGGATTACTGAATA
TACAATCCAAATACAATGTGGACGTCTATTATAAAGAAGGCGTTAAAACAGAAGAAGATATCGTAAATGCGATTGAGGAT
TTTCATAAGAGGGGCGTCAATCTGCTCTATGGCCATGGGAGTGAATATGCTGAGGTGTTTAACTTGGTCGGCGAAGATTA
TCCAGATATGGAATTCGTCATTTCCAATGCGAAAGCGAAAGCTGATAATGTAACGAGTGTCCATTTTAGCGGGGAAGCAA
TGGGCTTTTTTGGAGGAATGACTGCTGCCCATATGTCGAAAACGAATCAGGTCGGTGTAATTGCTTCCTTTACGTGGCAG
CCTGAGGTTGACGGTTTTATCAAAGGGGCCAAGTATGAAAATCCGGATATAGAGGTAAATACGAAATATACGGATCATTG
GGATGATGATACAACAGCAGTAAAGCTTTATCAGAAAATGAAGAACGAAGGCGCGGATGTTGTGTATCCCGCCGGAGACG
GGTATAATGTTCCTGTAATTCAGCAAATCAAAAAAGACGGTCTTTATGCCATTGGCTACGTCACAGATCAATCGGATCTG
GGCGAGAATACCGTATTAACCAGCACGGTGCAAAATGTGGACAAGGCCTATGAAATCATTGCTGAACAATTTAATAAAGG
CACCCTTGAGGGCGGCGATCATTACTACGACCTGAATACGGGAGTCGTTGAGATGGGAACATTCAGCCCGCTCGTCGACA
AAGACTTTCAGCAAAGAATCGCCAAGCTGATCAAAACATACAACAAAACAGGCGAGCTGCCAAAAAACGAGTAA

Domains

Predicted by InterproScan.

• ABC transporter substrate-binding protein PnrA-like (Bmp) (27-317)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
med	Bacillus subtilis subsp. subtilis str. 168	99.369	100	0.994