Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   KJP47_RS04665 Genome accession   NZ_OX419577
Coordinates   918871..919665 (+) Length   264 a.a.
NCBI ID   WP_121591552.1    Uniprot ID   -
Organism   Bacillus subtilis isolate NRS6120     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 913871..924665
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KJP47_RS04635 (NRS6120_04940) sxzA 914712..915743 (+) 1032 WP_213384145.1 iron ABC transporter permease -
  KJP47_RS04640 (NRS6120_04945) yfhB 915858..916739 (+) 882 WP_121591549.1 PhzF family phenazine biosynthesis isomerase -
  KJP47_RS04645 (NRS6120_04950) yfhC 916826..917410 (+) 585 WP_213384144.1 nitroreductase -
  KJP47_RS04650 (NRS6120_04955) yfhD 917449..917640 (-) 192 WP_003233561.1 YfhD family protein -
  KJP47_RS04655 (NRS6120_04960) yfhE 917707..917817 (-) 111 WP_003223230.1 YfhE family protein -
  KJP47_RS04660 yfhF 917884..918782 (-) 899 Protein_868 TIGR01777 family oxidoreductase -
  KJP47_RS04665 (NRS6120_04975) recX 918871..919665 (+) 795 WP_121591552.1 recombination regulator RecX Regulator
  KJP47_RS04670 (NRS6120_04980) yfhH 919667..919981 (+) 315 WP_003244592.1 YfhH family protein -
  KJP47_RS04675 (NRS6120_04985) yfhI 920125..921318 (+) 1194 WP_003243500.1 MFS transporter -
  KJP47_RS04680 (NRS6120_04990) sspK 921350..921502 (-) 153 WP_003223241.1 small, acid-soluble spore protein K -
  KJP47_RS04685 (NRS6120_04995) yfhJ 921627..921896 (+) 270 WP_003243789.1 YfhJ family protein -
  KJP47_RS04695 (NRS6120_05015) yfhK 923331..923852 (+) 522 WP_213384025.1 SH3 domain-containing protein -
  KJP47_RS04700 (NRS6120_05020) spdL 923937..924269 (+) 333 WP_024573182.1 SdpC immunity protein SpdL -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 30964.16 Da        Isoelectric Point: 6.6687

>NTDB_id=1157723 KJP47_RS04665 WP_121591552.1 918871..919665(+) (recX) [Bacillus subtilis isolate NRS6120]
MPFITKISTQKKNTERFNIFLDDKYAFSVDADVLVKFELKKGKELDDLDIIEIQYGDEVKKGFNRALDFLSYRMRSTKEV
EDHLKKKETSPPVIAEVIHRLNDYKYLNDQEFAAAYVSTHKKTNGKGPDVLFRELRAKGIDDDTIKEALSSFSFEDQTRE
AVKHVEKLLKKDKKLSTKELKQRAQLQLQRKGFSFDVISAAMDQIEYENDEDTEKEALRLHAEKAFRKYRYDGSYESAMK
VKQFLFRKGFSLDLIEQLLQEEEN

Nucleotide


Download         Length: 795 bp        

>NTDB_id=1157723 KJP47_RS04665 WP_121591552.1 918871..919665(+) (recX) [Bacillus subtilis isolate NRS6120]
ATGCCGTTTATTACAAAAATATCAACGCAAAAAAAGAATACGGAACGCTTCAATATTTTTCTGGATGATAAATACGCCTT
CAGCGTGGACGCGGATGTGCTCGTGAAATTTGAGCTCAAGAAGGGAAAAGAACTCGATGATCTTGACATCATTGAGATTC
AATACGGCGATGAAGTGAAGAAAGGCTTCAACCGTGCGCTTGACTTTTTATCCTATCGAATGCGGTCGACGAAAGAGGTC
GAGGACCACTTAAAGAAAAAAGAAACCTCGCCCCCCGTCATTGCGGAAGTCATCCATAGGCTTAACGATTACAAGTACTT
AAACGACCAGGAATTTGCCGCAGCCTATGTCAGCACTCACAAAAAAACAAACGGAAAAGGCCCTGATGTTTTGTTCAGAG
AGCTAAGAGCGAAGGGAATTGATGACGATACAATTAAGGAGGCGCTAAGTTCCTTTTCCTTTGAAGATCAGACAAGAGAA
GCGGTCAAACATGTTGAAAAGCTTCTCAAAAAAGATAAAAAGCTTTCGACGAAAGAACTCAAACAGCGCGCCCAGCTGCA
GCTTCAGCGCAAGGGCTTCTCATTTGATGTTATCAGCGCGGCGATGGATCAGATTGAATATGAAAATGATGAAGACACAG
AGAAAGAAGCGCTGCGCCTTCACGCGGAAAAAGCGTTTAGAAAATACCGCTATGACGGCTCATATGAAAGCGCCATGAAG
GTCAAACAATTTTTATTCCGCAAAGGATTCTCACTCGATTTAATCGAGCAATTACTGCAGGAAGAGGAGAACTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

100

99.621

0.996

Multiple sequence alignment