Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   KJP47_RS02230 Genome accession   NZ_OX419577
Coordinates   440641..441591 (+) Length   316 a.a.
NCBI ID   WP_213382643.1    Uniprot ID   -
Organism   Bacillus subtilis isolate NRS6120     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 435641..446591
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KJP47_RS02205 (NRS6120_02335) rapC 437101..438249 (+) 1149 WP_015252823.1 response regulator aspartate phosphatase RapC Regulator
  KJP47_RS02210 (NRS6120_02340) phrC 438233..438355 (+) 123 WP_003224994.1 phosphatase RapC inhibitor PhrC Regulator
  KJP47_RS02215 (NRS6120_02345) yczM 438455..438544 (-) 90 WP_015482794.1 YjcZ family sporulation protein -
  KJP47_RS02220 (NRS6120_02350) yczN 438626..438739 (-) 114 WP_032728921.1 YjcZ family sporulation protein -
  KJP47_RS02225 (NRS6120_02355) thrD 438892..440256 (-) 1365 WP_213382649.1 aspartate kinase -
  KJP47_RS02230 (NRS6120_02360) ceuB 440641..441591 (+) 951 WP_213382643.1 ABC transporter permease Machinery gene
  KJP47_RS02235 (NRS6120_02365) yclO 441584..442531 (+) 948 WP_003246705.1 petrobactin ABC transporter permease YclO -
  KJP47_RS02240 (NRS6120_02370) yclP 442525..443283 (+) 759 WP_213382642.1 ABC transporter ATP-binding protein -
  KJP47_RS02245 (NRS6120_02375) yclQ 443305..444258 (+) 954 WP_213382640.1 siderophore ABC transporter substrate-binding protein -
  KJP47_RS02250 (NRS6120_02380) ycnB 444304..445722 (-) 1419 WP_014478836.1 MDR family MFS transporter -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34901.30 Da        Isoelectric Point: 9.9364

>NTDB_id=1157722 KJP47_RS02230 WP_213382643.1 440641..441591(+) (ceuB) [Bacillus subtilis isolate NRS6120]
MKLRYLFILLIILAVTSVFIGVEDLSPLDLFDLSKQEASTLFASRLPRLISIVIAGLSMSICGLIMQQISRNKFVSPTTA
GTMDWARLGILISLLLFTSASPLIKMLVAFVFALAGNFLFMKILERIKFNDTIFIPLVGLMLGNIVSSIATFIAYKYDLI
QNVSSWLQGDFSLVVKGRYELLYLSIPLVIIAYVYADKFTLAGMGESFSVNLGLKYKRVVNIGLIIVSLITSLVILTVGM
LPFLGLIIPNIVSIYRGDNLKSSLPHTALLGAVFVLFCDILGRIIIFPYEISIGLMVGIIGSGIFLFMLLRRKTYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=1157722 KJP47_RS02230 WP_213382643.1 440641..441591(+) (ceuB) [Bacillus subtilis isolate NRS6120]
ATGAAGCTACGTTACTTATTTATTCTACTTATCATATTAGCAGTCACATCTGTATTTATCGGCGTAGAAGATCTGTCGCC
GCTTGATCTCTTCGATTTAAGCAAACAAGAGGCGTCAACGCTGTTTGCAAGCCGTTTGCCGCGATTGATCAGCATTGTCA
TCGCGGGATTAAGCATGAGCATCTGCGGTTTGATTATGCAGCAGATCAGCAGAAACAAATTCGTGTCACCGACTACGGCG
GGCACGATGGATTGGGCGAGGCTCGGCATTTTAATTTCCCTGCTGCTGTTTACATCCGCCAGTCCTTTAATTAAAATGCT
GGTTGCGTTTGTCTTTGCCCTTGCAGGAAATTTTCTGTTTATGAAAATCCTTGAAAGAATCAAGTTTAACGACACCATCT
TTATTCCGCTTGTCGGTTTAATGCTCGGGAATATCGTCAGTTCAATCGCGACATTTATCGCATATAAATATGACTTGATC
CAGAATGTGTCATCATGGCTGCAGGGAGACTTCTCTTTAGTCGTGAAAGGAAGATACGAGCTTCTTTATCTGAGTATTCC
GCTCGTCATCATTGCCTATGTGTATGCGGATAAATTCACATTGGCCGGTATGGGTGAAAGCTTTTCTGTCAATCTCGGCC
TCAAGTACAAACGGGTTGTGAACATCGGGCTCATTATCGTGTCCCTGATCACGTCCCTTGTCATTTTGACTGTCGGTATG
CTGCCGTTTCTCGGTTTAATCATCCCGAATATTGTATCGATTTACAGAGGAGACAATCTGAAGAGCAGCCTGCCGCATAC
TGCGCTGTTGGGAGCGGTGTTTGTGCTGTTTTGCGATATACTGGGCAGAATCATTATCTTCCCTTATGAAATCTCGATTG
GCCTGATGGTCGGAATCATCGGCAGCGGCATTTTCCTGTTTATGCTGTTAAGGAGAAAAACCTATGCGTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

52.215

100

0.522

Multiple sequence alignment