Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   KJP51_RS07700 Genome accession   NZ_OX419576
Coordinates   1470185..1470760 (+) Length   191 a.a.
NCBI ID   WP_003232378.1    Uniprot ID   -
Organism   Bacillus subtilis isolate NRS6105     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1465185..1475760
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KJP51_RS07670 (NRS6105_07600) dapD 1465371..1466081 (+) 711 WP_003218680.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  KJP51_RS07675 (NRS6105_07605) dapI 1466151..1467275 (+) 1125 WP_032721474.1 N-acetyldiaminopimelate deacetylase -
  KJP51_RS07680 (NRS6105_07610) ykuS 1467337..1467582 (+) 246 WP_003232382.1 YkuS family protein -
  KJP51_RS07685 (NRS6105_07615) mscT 1467619..1468422 (-) 804 WP_003244994.1 small-conductance mechanosensitive channel protein MscT -
  KJP51_RS07690 (NRS6105_07620) ahpA 1468659..1469201 (+) 543 WP_003245371.1 biofilm-specific peroxidase AhpA -
  KJP51_RS07695 (NRS6105_07625) ykuV 1469273..1469719 (+) 447 WP_015252187.1 thiol-disulfide oxidoreductase YkuV -
  KJP51_RS07700 (NRS6105_07630) rok 1470185..1470760 (+) 576 WP_003232378.1 transcriptional regulator Rok Regulator
  KJP51_RS07705 (NRS6105_07635) cse15 1470801..1471766 (-) 966 WP_110109385.1 spore protein Cse15 -
  KJP51_RS07710 (NRS6105_07640) mobA 1471903..1472502 (+) 600 WP_014479670.1 molybdenum cofactor guanylyltransferase -
  KJP51_RS07715 (NRS6105_07645) moeB 1472553..1473572 (+) 1020 WP_032721477.1 molybdopterin-synthase adenylyltransferase MoeB -
  KJP51_RS07720 (NRS6105_07650) glp 1473590..1474882 (+) 1293 WP_029317736.1 gephyrin-like molybdotransferase Glp -
  KJP51_RS07725 (NRS6105_07655) mobB 1474843..1475364 (+) 522 WP_003232370.1 molybdopterin-guanine dinucleotide biosynthesis protein B -

Sequence

Protein


Download         Length: 191 a.a.        Molecular weight: 21839.85 Da        Isoelectric Point: 9.8633

>NTDB_id=1157663 KJP51_RS07700 WP_003232378.1 1470185..1470760(+) (rok) [Bacillus subtilis isolate NRS6105]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDRNGSPSEIKKDFRSEKKPDSLPVLAELAAQEIRSYQPQS
QQQSVQPQLQSISSLPAGIPDGTTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFMQ
SLIKMYPEVKKPYRGQYILEGEIESAESANE

Nucleotide


Download         Length: 576 bp        

>NTDB_id=1157663 KJP51_RS07700 WP_003232378.1 1470185..1470760(+) (rok) [Bacillus subtilis isolate NRS6105]
ATGTTTAATGAAAGAGAAGCTTTGCGCTTGCGGTTAGAACAATTAAATGAAGCTGAAGTGAAAGTCATTCGTGAATATCA
AATTGAACGTGATAAAATATACGCAAAATTAAGAGAGCTGGACAGAAATGGAAGCCCTTCCGAAATCAAAAAGGATTTCC
GTTCTGAAAAAAAACCTGACTCTCTGCCGGTTCTCGCTGAGCTTGCGGCTCAGGAAATCAGAAGCTATCAGCCGCAATCA
CAGCAGCAGTCTGTTCAGCCTCAGCTTCAATCTATTTCCTCTCTTCCTGCCGGTATACCAGACGGAACAACACGAAGAAG
AAGAGGAACGGCAAGACCGGGATCAAAAGCAGCTAAGCTGCGTGAAGCTGCTATTAAAACATTAAAACGCCACAACGCGG
CGATTAAGAGCTCGGAGCTTCAAAAAGAGATTGAAAAAGAAAGCGGTCTTGAAATCCCTAATATGACAACATTTATGCAA
AGCTTAATTAAAATGTACCCGGAAGTGAAAAAGCCATATCGCGGGCAGTACATTTTAGAGGGTGAAATCGAATCTGCAGA
ATCAGCAAATGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment