Detailed information
Bioinformatically predicted
Overview
| Name | abrB | Type | Regulator |
| Locus tag | KJP51_RS00245 | Genome accession | NZ_OX419576 |
| Coordinates | 44363..44653 (-) | Length | 96 a.a. |
| NCBI ID | WP_003226760.1 | Uniprot ID | A0A7G9PCZ4 |
| Organism | Bacillus subtilis isolate NRS6105 | ||
| Function | repression of comK; repression of rok (predicted from homology) Competence regulation |
||
Genomic Context
Location: 39363..49653
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KJP51_RS00205 (NRS6105_00215) | darA | 39386..39715 (+) | 330 | WP_003242755.1 | cyclic di-AMP receptor DarA | - |
| KJP51_RS00210 (NRS6105_00220) | yaaR | 39728..40168 (+) | 441 | WP_009966249.1 | YaaR family protein | - |
| KJP51_RS00215 (NRS6105_00225) | holB | 40180..41169 (+) | 990 | WP_213377380.1 | DNA polymerase III subunit delta' | - |
| KJP51_RS00220 (NRS6105_00230) | ricT | 41172..41999 (+) | 828 | WP_003226767.1 | competence/sporulation regulator complex protein RicT | - |
| KJP51_RS00225 (NRS6105_00235) | yabA | 42014..42373 (+) | 360 | WP_003218308.1 | replication initiation-control protein YabA | - |
| KJP51_RS00230 (NRS6105_00240) | trmNF | 42432..43175 (+) | 744 | WP_003244526.1 | tRNA1(Val) (adenine(37)-N6)-methyltransferase | - |
| KJP51_RS00235 (NRS6105_00245) | yazA | 43162..43461 (+) | 300 | WP_046380716.1 | GIY-YIG nuclease family protein | - |
| KJP51_RS00240 (NRS6105_00250) | rsmI | 43436..44314 (+) | 879 | WP_046380717.1 | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | - |
| KJP51_RS00245 (NRS6105_00255) | abrB | 44363..44653 (-) | 291 | WP_003226760.1 | transition state genes transcriptional regulator AbrB | Regulator |
| KJP51_RS00250 (NRS6105_00260) | metG | 45148..47142 (+) | 1995 | WP_089172433.1 | methionine--tRNA ligase | - |
| KJP51_RS00255 (NRS6105_00265) | dayD | 47221..47988 (+) | 768 | WP_014475570.1 | TatD family hydrolase | - |
| KJP51_RS00260 (NRS6105_00270) | yabE | 48144..49457 (+) | 1314 | WP_003226754.1 | ubiquitin-like domain-containing protein | - |
Sequence
Protein
Download Length: 96 a.a. Molecular weight: 10772.62 Da Isoelectric Point: 6.3482
>NTDB_id=1157629 KJP51_RS00245 WP_003226760.1 44363..44653(-) (abrB) [Bacillus subtilis isolate NRS6105]
MFMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLAGGKLVLSKEG
AEQIISEIQNQLQNLK
MFMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLAGGKLVLSKEG
AEQIISEIQNQLQNLK
Nucleotide
Download Length: 291 bp
>NTDB_id=1157629 KJP51_RS00245 WP_003226760.1 44363..44653(-) (abrB) [Bacillus subtilis isolate NRS6105]
ATGTTTATGAAATCTACTGGTATTGTACGTAAAGTTGATGAATTAGGACGTGTAGTTATTCCTATCGAACTGCGTCGTAC
TCTTGGAATCGCAGAAAAAGATGCTCTTGAAATCTATGTTGATGATGAAAAAATCATCCTTAAAAAATATAAACCAAACA
TGACTTGCCAAGTAACTGGTGAAGTTTCTGATGATAACCTTAAACTTGCAGGCGGTAAATTGGTTCTTAGTAAAGAAGGC
GCTGAGCAAATCATCAGCGAAATCCAAAACCAGCTTCAAAACCTTAAATAA
ATGTTTATGAAATCTACTGGTATTGTACGTAAAGTTGATGAATTAGGACGTGTAGTTATTCCTATCGAACTGCGTCGTAC
TCTTGGAATCGCAGAAAAAGATGCTCTTGAAATCTATGTTGATGATGAAAAAATCATCCTTAAAAAATATAAACCAAACA
TGACTTGCCAAGTAACTGGTGAAGTTTCTGATGATAACCTTAAACTTGCAGGCGGTAAATTGGTTCTTAGTAAAGAAGGC
GCTGAGCAAATCATCAGCGAAATCCAAAACCAGCTTCAAAACCTTAAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| abrB | Bacillus subtilis subsp. subtilis str. 168 |
100 |
100 |
1 |