Detailed information
Bioinformatically predicted
Overview
| Name | comGB | Type | Machinery gene |
| Locus tag | KJP52_RS12555 | Genome accession | NZ_OX419575 |
| Coordinates | 2445465..2446502 (-) | Length | 345 a.a. |
| NCBI ID | WP_009967727.1 | Uniprot ID | A0AAE2SM96 |
| Organism | Bacillus subtilis isolate NRS6121 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2440465..2451502
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KJP52_RS12505 (NRS6121_12410) | tasA | 2440563..2441348 (-) | 786 | WP_003230183.1 | biofilm matrix protein TasA | - |
| KJP52_RS12510 (NRS6121_12415) | sipW | 2441412..2441984 (-) | 573 | WP_003230181.1 | signal peptidase I | - |
| KJP52_RS12515 (NRS6121_12420) | tapA | 2441968..2442729 (-) | 762 | WP_003230180.1 | amyloid fiber anchoring/assembly protein TapA | - |
| KJP52_RS12520 (NRS6121_12425) | yqzG | 2443001..2443327 (+) | 327 | WP_003246051.1 | YqzG/YhdC family protein | - |
| KJP52_RS12525 (NRS6121_12430) | spoIIT | 2443369..2443548 (-) | 180 | WP_003230176.1 | YqzE family protein | - |
| KJP52_RS12530 (NRS6121_12435) | comGG | 2443619..2443993 (-) | 375 | WP_003230170.1 | ComG operon protein ComGG | Machinery gene |
| KJP52_RS12535 (NRS6121_12440) | comGF | 2443994..2444377 (-) | 384 | WP_003230168.1 | ComG operon protein ComGF | Machinery gene |
| KJP52_RS12540 (NRS6121_12445) | comGE | 2444403..2444750 (-) | 348 | WP_003230165.1 | ComG operon protein 5 | Machinery gene |
| KJP52_RS12545 (NRS6121_12450) | comGD | 2444734..2445165 (-) | 432 | WP_004398628.1 | comG operon protein ComGD | Machinery gene |
| KJP52_RS12550 (NRS6121_12455) | comGC | 2445155..2445451 (-) | 297 | WP_003230162.1 | comG operon protein ComGC | Machinery gene |
| KJP52_RS12555 (NRS6121_12460) | comGB | 2445465..2446502 (-) | 1038 | WP_009967727.1 | comG operon protein ComGB | Machinery gene |
| KJP52_RS12560 (NRS6121_12465) | comGA | 2446489..2447559 (-) | 1071 | WP_004399124.1 | competence protein ComGA | Machinery gene |
| KJP52_RS12565 (NRS6121_12475) | corA | 2447971..2448924 (-) | 954 | WP_004399136.1 | magnesium transporter CorA | - |
| KJP52_RS12570 (NRS6121_12480) | yqhB | 2449067..2450395 (+) | 1329 | WP_009967730.1 | hemolysin family protein | - |
| KJP52_RS12575 (NRS6121_12485) | rsbRD | 2450448..2451284 (-) | 837 | WP_004398754.1 | RsbT co-antagonist protein RsbRD | - |
Sequence
Protein
Download Length: 345 a.a. Molecular weight: 39762.26 Da Isoelectric Point: 9.6257
>NTDB_id=1157593 KJP52_RS12555 WP_009967727.1 2445465..2446502(-) (comGB) [Bacillus subtilis isolate NRS6121]
MKKIRKVWLLKDQARLLKRLGEMTAGGYTLLDGLRLMELQMNKRQAADLTDSVTCLREGAPFYQVLKSLSFHKEAVGICY
FAETHGELPASMIQSGELLERKIAQADQLKRVLRYPLFLIFTVAVMFYMLQSIIIPQFSGIYQSMNMETSRSTDMLFAFF
QHIDLVIILLVLFTAGIGIYYWLVFKKKSPARQMLICIRIPLVGKLVKLFNSYFFSLQLSSLLKSGLSIYDSLNAFKHQT
FLPFYRCEAEQLIERLKAGESIESAICGSLFYETDLSKVISHGQLSGRLDRELFTYSQFILQRLEHKAQKWTGILQPMIY
GFVAAMILLVYLSMLVPMYQMMNQM
MKKIRKVWLLKDQARLLKRLGEMTAGGYTLLDGLRLMELQMNKRQAADLTDSVTCLREGAPFYQVLKSLSFHKEAVGICY
FAETHGELPASMIQSGELLERKIAQADQLKRVLRYPLFLIFTVAVMFYMLQSIIIPQFSGIYQSMNMETSRSTDMLFAFF
QHIDLVIILLVLFTAGIGIYYWLVFKKKSPARQMLICIRIPLVGKLVKLFNSYFFSLQLSSLLKSGLSIYDSLNAFKHQT
FLPFYRCEAEQLIERLKAGESIESAICGSLFYETDLSKVISHGQLSGRLDRELFTYSQFILQRLEHKAQKWTGILQPMIY
GFVAAMILLVYLSMLVPMYQMMNQM
Nucleotide
Download Length: 1038 bp
>NTDB_id=1157593 KJP52_RS12555 WP_009967727.1 2445465..2446502(-) (comGB) [Bacillus subtilis isolate NRS6121]
ATGAAAAAGATTAGAAAAGTCTGGTTGTTAAAGGATCAAGCCAGGTTATTAAAGAGGCTCGGTGAAATGACTGCGGGCGG
ATATACACTTCTGGATGGATTACGCCTGATGGAACTTCAGATGAATAAGAGGCAGGCGGCTGACTTGACTGATTCGGTCA
CTTGTTTGAGGGAAGGGGCTCCGTTTTATCAAGTACTAAAGAGTTTGTCATTTCATAAGGAAGCCGTAGGTATTTGTTAT
TTTGCTGAAACACATGGTGAACTGCCTGCTTCAATGATCCAGAGCGGAGAGCTGCTGGAACGAAAAATTGCACAGGCAGA
CCAGCTGAAAAGAGTGCTGCGCTATCCGCTTTTCCTCATCTTTACGGTCGCTGTCATGTTTTATATGTTACAGTCCATCA
TCATTCCTCAGTTTTCCGGTATCTATCAATCGATGAATATGGAAACCTCACGTTCAACCGATATGCTTTTTGCTTTTTTT
CAGCATATTGATCTTGTGATCATTTTGCTTGTTCTTTTTACAGCAGGTATCGGGATTTATTATTGGCTTGTGTTTAAGAA
AAAATCACCTGCCCGGCAAATGCTGATTTGTATCAGGATTCCTTTGGTTGGAAAGCTTGTAAAGCTGTTTAACAGCTACT
TTTTTTCTTTGCAGCTAAGCAGCCTTTTAAAATCAGGCCTCTCAATTTATGACAGCCTTAATGCATTTAAACATCAAACG
TTTCTCCCTTTCTACCGCTGCGAGGCTGAACAATTGATTGAACGGCTAAAAGCCGGTGAGTCAATTGAATCCGCTATTTG
TGGAAGCCTTTTTTATGAAACTGATTTATCAAAAGTCATATCTCACGGCCAGCTGAGCGGCCGATTGGATCGGGAGCTTT
TCACATACAGCCAATTCATATTACAGCGGCTGGAACACAAAGCGCAAAAATGGACAGGCATCCTTCAGCCAATGATTTAT
GGATTTGTTGCAGCGATGATCTTACTTGTGTATTTATCTATGCTTGTGCCTATGTATCAGATGATGAATCAAATGTGA
ATGAAAAAGATTAGAAAAGTCTGGTTGTTAAAGGATCAAGCCAGGTTATTAAAGAGGCTCGGTGAAATGACTGCGGGCGG
ATATACACTTCTGGATGGATTACGCCTGATGGAACTTCAGATGAATAAGAGGCAGGCGGCTGACTTGACTGATTCGGTCA
CTTGTTTGAGGGAAGGGGCTCCGTTTTATCAAGTACTAAAGAGTTTGTCATTTCATAAGGAAGCCGTAGGTATTTGTTAT
TTTGCTGAAACACATGGTGAACTGCCTGCTTCAATGATCCAGAGCGGAGAGCTGCTGGAACGAAAAATTGCACAGGCAGA
CCAGCTGAAAAGAGTGCTGCGCTATCCGCTTTTCCTCATCTTTACGGTCGCTGTCATGTTTTATATGTTACAGTCCATCA
TCATTCCTCAGTTTTCCGGTATCTATCAATCGATGAATATGGAAACCTCACGTTCAACCGATATGCTTTTTGCTTTTTTT
CAGCATATTGATCTTGTGATCATTTTGCTTGTTCTTTTTACAGCAGGTATCGGGATTTATTATTGGCTTGTGTTTAAGAA
AAAATCACCTGCCCGGCAAATGCTGATTTGTATCAGGATTCCTTTGGTTGGAAAGCTTGTAAAGCTGTTTAACAGCTACT
TTTTTTCTTTGCAGCTAAGCAGCCTTTTAAAATCAGGCCTCTCAATTTATGACAGCCTTAATGCATTTAAACATCAAACG
TTTCTCCCTTTCTACCGCTGCGAGGCTGAACAATTGATTGAACGGCTAAAAGCCGGTGAGTCAATTGAATCCGCTATTTG
TGGAAGCCTTTTTTATGAAACTGATTTATCAAAAGTCATATCTCACGGCCAGCTGAGCGGCCGATTGGATCGGGAGCTTT
TCACATACAGCCAATTCATATTACAGCGGCTGGAACACAAAGCGCAAAAATGGACAGGCATCCTTCAGCCAATGATTTAT
GGATTTGTTGCAGCGATGATCTTACTTGTGTATTTATCTATGCTTGTGCCTATGTATCAGATGATGAATCAAATGTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGB | Bacillus subtilis subsp. subtilis str. 168 |
100 |
93.623 |
0.936 |