Detailed information    

insolico Bioinformatically predicted

Overview

Name   sepM   Type   Regulator
Locus tag   SMUFR_RS02470 Genome accession   NZ_CP007016
Coordinates   485526..486566 (+) Length   346 a.a.
NCBI ID   WP_002262039.1    Uniprot ID   -
Organism   Streptococcus mutans UA159-FR     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context

Location: 480526..491566
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SMUFR_RS02440 - 480775..480978 (+) 204 WP_002263011.1 hypothetical protein -
  SMUFR_RS02445 (SMUFR_0442) - 481019..481252 (+) 234 WP_002263010.1 hypothetical protein -
  SMUFR_RS02450 (SMUFR_0443) - 481473..482039 (+) 567 WP_002279620.1 TetR/AcrR family transcriptional regulator -
  SMUFR_RS02455 (SMUFR_0444) - 482160..483935 (+) 1776 WP_002262036.1 oleate hydratase -
  SMUFR_RS02460 (SMUFR_0445) rsmD 484519..485058 (+) 540 WP_002262037.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  SMUFR_RS02465 (SMUFR_0446) coaD 485048..485548 (+) 501 WP_002262038.1 pantetheine-phosphate adenylyltransferase -
  SMUFR_RS02470 (SMUFR_0447) sepM 485526..486566 (+) 1041 WP_002262039.1 S16 family serine protease SepM Regulator
  SMUFR_RS02475 (SMUFR_0448) - 486639..487970 (+) 1332 WP_002262040.1 bifunctional metallophosphatase/5'-nucleotidase -
  SMUFR_RS02480 (SMUFR_0449) - 487967..488515 (+) 549 WP_002262041.1 YutD family protein -
  SMUFR_RS02485 (SMUFR_0450) rlmN 488512..489597 (+) 1086 WP_002262042.1 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN -
  SMUFR_RS02490 (SMUFR_0451) - 489597..490133 (+) 537 WP_002262043.1 VanZ family protein -

Sequence

Protein


Download         Length: 346 a.a.        Molecular weight: 37980.92 Da        Isoelectric Point: 10.1735

>NTDB_id=115755 SMUFR_RS02470 WP_002262039.1 485526..486566(+) (sepM) [Streptococcus mutans UA159-FR]
MKTNKKFKWWLISGISLILLLMVFFFPLPYYLEMPGGAYDIRSVVTVNHKEDKEKGSYNFVAVSLSKATPIQVLYAWLTP
FTEITSAKETTGGVSDADYMRINQFYMETSQNGAIYKALSLAHKKASFNYMGVYVLQVSRNSTFKGVLNIADTVTGVNDK
TFHSSKELIKYVSGLKLGSKVSVQYTSENKKKTAKGKVIKLSNGKNGIGIGLVDHTKVTSDDKIEFSTNGIGGPSAGLMF
TLDIYDQLVKEDLRKGRIIAGTGTIGEDGSVGDIGGADMKVAAADRINADIFFVPNNPVSKATLKKNPKALTNYQEAKQA
AKKLGTKMKIVPVKNVQEAIDYLRKH

Nucleotide


Download         Length: 1041 bp        

>NTDB_id=115755 SMUFR_RS02470 WP_002262039.1 485526..486566(+) (sepM) [Streptococcus mutans UA159-FR]
GTGAAAACAAACAAAAAATTTAAATGGTGGCTAATCAGCGGTATCAGTCTTATTTTGCTTTTAATGGTATTCTTTTTTCC
TCTTCCTTACTATTTAGAAATGCCCGGCGGAGCCTATGATATTCGTTCTGTTGTGACGGTTAATCATAAAGAAGATAAAG
AGAAAGGATCTTATAATTTTGTAGCTGTCTCTCTTAGTAAGGCAACCCCCATACAAGTCCTCTATGCTTGGTTGACCCCT
TTTACAGAAATTACCAGTGCCAAGGAAACAACTGGTGGTGTTAGTGATGCGGATTATATGAGGATTAATCAGTTTTATAT
GGAAACCTCACAAAATGGAGCTATCTATAAAGCTCTTTCTTTAGCTCATAAAAAGGCAAGCTTTAATTATATGGGTGTTT
ATGTTTTGCAGGTTAGTAGGAATTCAACATTCAAGGGTGTTTTAAATATTGCTGATACTGTAACAGGCGTTAATGACAAG
ACCTTTCATAGTTCAAAAGAATTGATTAAATATGTGTCTGGACTGAAATTAGGCAGCAAGGTCAGTGTTCAATATACTTC
TGAAAATAAGAAGAAAACAGCCAAGGGCAAAGTTATTAAATTGTCAAATGGCAAAAATGGTATTGGCATTGGCTTGGTTG
ATCATACCAAGGTCACTTCTGATGATAAAATCGAATTTAGCACAAATGGTATTGGAGGGCCAAGTGCCGGTCTCATGTTT
ACCCTTGATATTTACGATCAACTAGTGAAAGAGGACTTACGTAAGGGTCGTATTATTGCAGGTACTGGTACTATTGGAGA
AGACGGGTCTGTTGGGGATATTGGCGGTGCCGATATGAAAGTGGCAGCAGCAGATAGGATTAATGCAGATATCTTTTTTG
TTCCCAATAATCCTGTAAGTAAGGCAACTTTGAAAAAAAATCCCAAAGCTCTCACTAATTATCAAGAAGCTAAGCAGGCT
GCTAAAAAATTAGGCACTAAGATGAAGATTGTCCCTGTTAAAAATGTGCAGGAGGCTATTGATTACCTAAGAAAACACTA
A

Domains

Predicted by InterproScan.

PDZ domain (PDZ_2)

(131-195)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

100

100

1

Multiple sequence alignment