Detailed information NTG0115753

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: RG33_RS10920
• Genome accession: NZ_CP010133
• Coordinates: 2152233..2153258 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain C11
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 2147233..2158258

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RG33_RS10900 (RG33_10145)	metJ	2148294..2148611 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
RG33_RS10905 (RG33_10150)	yiiX	2148795..2149403 (+)	609	WP_000797344.1	YiiX family permuted papain-like enzyme	-
RG33_RS10910 (RG33_10155)	rpmE	2149464..2149676 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
RG33_RS10915 (RG33_10160)	priA	2149879..2152077 (+)	2199	WP_040090268.1	primosomal protein N'	Machinery gene
RG33_RS10920 (RG33_10165)	cytR	2152233..2153258 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
RG33_RS10925 (RG33_10170)	ftsN	2153350..2154309 (+)	960	WP_000068828.1	cell division protein FtsN	-
RG33_RS10930 (RG33_10175)	hslV	2154402..2154932 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
RG33_RS10935 (RG33_10180)	hslU	2154942..2156273 (+)	1332	WP_001293343.1	HslU--HslV peptidase ATPase subunit	-
RG33_RS10940 (RG33_10185)	menA	2156340..2157266 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
RG33_RS10945 (RG33_10190)	rraA	2157359..2157844 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
RG33_RS10950 (RG33_10195)	zapB	2157929..2158174 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=115753 RG33_RS10920 WP_000644904.1 2152233..2153258(+) (cytR) [Escherichia coli strain C11]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=115753 RG33_RS10920 WP_000644904.1 2152233..2153258(+) (cytR) [Escherichia coli strain C11]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCAGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATTGATTTGATCATCACCAAACAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCAATGCAACAGCTGCTT
GATCTTCCACAACCGCCTACTGCAGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628