Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0A   Type   Regulator
Locus tag   KJP57_RS13520 Genome accession   NZ_OX419573
Coordinates   2571500..2572303 (-) Length   267 a.a.
NCBI ID   WP_003226427.1    Uniprot ID   -
Organism   Bacillus subtilis isolate NRS6085     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context

Location: 2566500..2577303
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KJP57_RS13495 (NRS6085_13505) glpQ 2567637..2568368 (-) 732 WP_116316553.1 glycerophosphodiester phosphodiesterase -
  KJP57_RS13500 (NRS6085_13510) yqiI 2568447..2569067 (-) 621 WP_010886565.1 N-acetylmuramoyl-L-alanine amidase -
  KJP57_RS13505 (NRS6085_13515) - 2569087..2569383 (-) 297 WP_014480225.1 hypothetical protein -
  KJP57_RS13510 - 2569691..2569843 (+) 153 WP_014480226.1 hypothetical protein -
  KJP57_RS13515 (NRS6085_13520) yqiG 2569916..2571034 (+) 1119 WP_017696437.1 NADH-dependent flavin oxidoreductase -
  KJP57_RS13520 (NRS6085_13530) spo0A 2571500..2572303 (-) 804 WP_003226427.1 sporulation transcription factor Spo0A Regulator
  KJP57_RS13525 (NRS6085_13535) spoIVB 2572579..2573859 (-) 1281 WP_086344063.1 SpoIVB peptidase -
  KJP57_RS13530 (NRS6085_13540) recN 2574034..2575764 (-) 1731 WP_038829742.1 DNA repair protein RecN Machinery gene
  KJP57_RS13535 (NRS6085_13545) argR 2575801..2576250 (-) 450 WP_003230265.1 arginine repressor ArgR -
  KJP57_RS13540 (NRS6085_13550) yqxC 2576348..2577193 (-) 846 WP_003230264.1 TlyA family RNA methyltransferase -

Sequence

Protein


Download         Length: 267 a.a.        Molecular weight: 29691.19 Da        Isoelectric Point: 6.3913

>NTDB_id=1157499 KJP57_RS13520 WP_003226427.1 2571500..2572303(-) (spo0A) [Bacillus subtilis isolate NRS6085]
MEKIKVCVADDNRELVSLLSEYIEGQEDMEVIGVAYNGQECLSLFKEKDPDVLVLDIIMPHLDGLAVLERLRESDLKKQP
NVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLVGHIRQVSGNASSVTHRAPSSQSSIIRSSQPEPKKKNLDASITSI
IHEIGVPAHIKGYLYLREAISMVYNDIELLGSITKVLYPDIAKKFNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTV
SMTKAKPTNSEFIAMVADKLRLEHKAS

Nucleotide


Download         Length: 804 bp        

>NTDB_id=1157499 KJP57_RS13520 WP_003226427.1 2571500..2572303(-) (spo0A) [Bacillus subtilis isolate NRS6085]
GTGGAGAAAATTAAAGTTTGTGTTGCTGATGATAATCGAGAGCTGGTAAGCCTGTTAAGTGAATATATAGAAGGACAGGA
AGACATGGAAGTGATCGGCGTTGCTTATAACGGACAGGAATGCCTGTCGCTGTTTAAAGAAAAAGATCCCGATGTGCTCG
TATTAGATATTATTATGCCGCATTTAGACGGACTTGCGGTTTTAGAGAGGCTGAGGGAATCAGATCTGAAAAAACAGCCG
AATGTCATTATGCTGACAGCCTTTGGACAGGAAGATGTCACGAAAAAGGCCGTCGATTTAGGCGCGTCCTACTTTATTCT
CAAACCGTTTGATATGGAAAACCTTGTCGGCCATATCCGCCAGGTCAGCGGAAATGCCAGCAGTGTGACGCATCGTGCGC
CATCATCGCAAAGCAGTATTATACGCAGCAGCCAGCCTGAACCAAAGAAGAAAAATCTCGACGCGAGCATCACAAGCATT
ATCCATGAAATCGGCGTCCCAGCCCATATTAAAGGCTATCTCTATCTGCGCGAAGCAATCTCAATGGTATACAATGACAT
CGAATTGCTCGGCAGCATTACAAAAGTCCTCTATCCGGACATCGCCAAAAAATTCAACACAACCGCAAGCCGTGTAGAAA
GAGCGATCCGCCATGCAATTGAAGTGGCATGGAGCAGAGGAAACATTGATTCCATTTCCTCGCTGTTCGGCTATACTGTC
AGCATGACAAAAGCTAAACCGACAAATTCGGAATTCATTGCAATGGTTGCGGATAAGCTGAGATTAGAGCATAAGGCTTC
TTAA

Domains

Predicted by InterproScan.

Sporulation initiation factor Spo0A C terminal (Spo0A_C)

(157-260)

Response regulator receiver domain (Response_reg)

(6-119)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment