Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   KJP57_RS07930 Genome accession   NZ_OX419573
Coordinates   1495862..1496326 (-) Length   154 a.a.
NCBI ID   WP_086343783.1    Uniprot ID   -
Organism   Bacillus subtilis isolate NRS6085     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1490862..1501326
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KJP57_RS07910 (NRS6085_07890) kinA 1491328..1493148 (+) 1821 WP_080529263.1 sporulation histidine kinase KinA -
  KJP57_RS07915 (NRS6085_07895) dapX 1493159..1494340 (-) 1182 WP_213407713.1 aminotransferase A -
  KJP57_RS07920 (NRS6085_07900) - 1494542..1494703 (-) 162 WP_003245246.1 hypothetical protein -
  KJP57_RS07925 (NRS6085_07905) cheV 1494907..1495818 (+) 912 WP_014476655.1 chemotaxis protein CheV -
  KJP57_RS07930 (NRS6085_07910) kre 1495862..1496326 (-) 465 WP_086343783.1 YkyB family protein Regulator
  KJP57_RS07935 (NRS6085_07915) ykuC 1496452..1497744 (-) 1293 WP_014479656.1 MFS transporter -
  KJP57_RS07940 (NRS6085_07920) ltdD 1497820..1498314 (-) 495 WP_072174092.1 L,D-transpeptidase family protein -
  KJP57_RS07945 (NRS6085_07925) ppeE 1498371..1499231 (-) 861 WP_003232400.1 metallophosphoesterase -
  KJP57_RS07950 (NRS6085_07930) fadH 1499374..1500138 (+) 765 WP_003232398.1 2,4-dienoyl-CoA reductase -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17865.68 Da        Isoelectric Point: 10.3545

>NTDB_id=1157491 KJP57_RS07930 WP_086343783.1 1495862..1496326(-) (kre) [Bacillus subtilis isolate NRS6085]
MDDHAYAKDLQPTVENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSKNPRFSQQQSDVLISIGD
YYFHMPPTKEDFEHLPHLGTLNQSYRNPKAQMSLTKAKHLLQEYVGMKEKPLVPNRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=1157491 KJP57_RS07930 WP_086343783.1 1495862..1496326(-) (kre) [Bacillus subtilis isolate NRS6085]
ATGGACGACCATGCATATGCGAAAGATCTGCAGCCAACCGTAGAAAATCTTTCAAAAGCAGTTTACACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTATATCTGCTGAAAAAACGGGCTTTGCAAAAGCTTGTCAAAGAAGGTAAAG
GAAAGAAAATAGGGCTTCATTTTTCAAAAAATCCAAGGTTCAGCCAACAGCAATCGGACGTGCTTATCTCAATCGGAGAC
TACTATTTTCACATGCCTCCAACTAAAGAAGACTTCGAACATCTTCCGCATTTAGGTACACTTAATCAATCGTACCGAAA
TCCTAAAGCTCAAATGTCTTTAACAAAAGCGAAACACCTATTGCAAGAATATGTCGGCATGAAAGAAAAGCCGCTAGTGC
CAAATCGCCAGCAGCCAGCTTACCATAAACCGGTCTTTAAAAAACTTGGCGAGAGTTACTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(14-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

99.351

100

0.994

Multiple sequence alignment