Detailed information NTG1157370

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: KJP55_RS20490
• Genome accession: NZ_OX419569
• Coordinates: 3891346..3892491 (+)
• Length: 381 a.a.
• NCBI ID: WP_003227549.1
• Uniprot ID: -
• Organism: Bacillus subtilis isolate NRS6118
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 3886346..3897491

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KJP55_RS20470 (NRS6118_20275)	albF	3886362..3887642 (+)	1281	WP_003242974.1	pitrilysin family protein	-
KJP55_RS20475 (NRS6118_20280)	albG	3887639..3888340 (+)	702	WP_003243391.1	antilisterial bacteriocin subtilosin biosynthesis protein AlbG	-
KJP55_RS20480 (NRS6118_20285)	ywhL	3888346..3889722 (-)	1377	WP_003244415.1	YncE family protein	-
KJP55_RS20485 (NRS6118_20290)	ywhK	3889761..3891116 (-)	1356	WP_003227552.1	YncE family protein	-
KJP55_RS22450	-	3891113..3891343 (-)	231	WP_009968328.1	hypothetical protein	-
KJP55_RS20490 (NRS6118_20295)	rapF	3891346..3892491 (+)	1146	WP_003227549.1	response regulator aspartate phosphatase RapF	Regulator
KJP55_RS20495 (NRS6118_20300)	phrF	3892475..3892594 (+)	120	WP_009968329.1	phosphatase RapF inhibitor PhrF	Regulator
KJP55_RS20500 (NRS6118_20305)	ywhH	3892693..3893166 (+)	474	WP_003227547.1	YbaK/EbsC family protein	-
KJP55_RS20505 (NRS6118_20310)	speB	3893198..3894070 (-)	873	WP_003227545.1	agmatinase	-
KJP55_RS20510 (NRS6118_20315)	speE	3894131..3894961 (-)	831	WP_003227543.1	spermidine synthase	-
KJP55_RS20515 (NRS6118_20320)	pbpG	3895163..3897238 (+)	2076	WP_003227540.1	transglycosylase domain-containing protein	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 45609.09 Da
• Isoelectric Point: 5.1503

>NTDB_id=1157370 KJP55_RS20490 WP_003227549.1 3891346..3892491(+) (rapF) [Bacillus subtilis isolate NRS6118]
MTGVISSSSIGEKINEWYMYIRRFSIPDAEYLRREIKQELDQMEEDQDLHLYYSLMEFRHNLMLEYLEPLEKMRIEEQPR
LSDLLLEIDKKQARLTGLLEYYFNFFRGMYELDQREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYYMKQTYFS
MDYARQAYEIYKEHEAYNIRLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYED
AIPYFKRAIAVFEESNILPSLPQAYFLITQIHYKLGKIDKAHEYHSKGMAYSQKAGDVIYLSEFEFLKSLYLSGPDEEAI
QGFFDFLESKMLYADLEDFAIDVAKYYHERKNFQKASAYFLKVEQVRQLIQGGVSLYEIEV

Nucleotide

• Length: 1146 bp

>NTDB_id=1157370 KJP55_RS20490 WP_003227549.1 3891346..3892491(+) (rapF) [Bacillus subtilis isolate NRS6118]
GTGACAGGTGTCATATCTTCTTCTTCCATCGGAGAAAAGATTAACGAATGGTATATGTACATACGCCGATTCAGCATACC
CGATGCAGAATATTTGCGACGAGAAATCAAGCAAGAGCTGGATCAAATGGAAGAAGATCAAGACCTTCATTTGTACTATT
CACTGATGGAGTTTCGGCACAACCTAATGCTTGAGTACCTTGAACCGTTAGAAAAAATGAGGATTGAGGAACAGCCGAGA
CTGTCTGATCTGCTGCTTGAGATTGATAAAAAACAGGCTCGTTTAACTGGTCTGCTTGAGTACTATTTTAACTTCTTCAG
AGGCATGTACGAGCTGGACCAGCGGGAATATCTGTCGGCTATTAAATTTTTCAAAAAGGCCGAAAGCAAGCTGATATTCG
TTAAGGATCGGATAGAGAAAGCTGAGTTTTTCTTTAAGATGTCTGAATCTTATTACTATATGAAACAAACGTATTTTTCA
ATGGACTATGCACGGCAAGCATATGAAATATACAAAGAACATGAAGCTTATAATATAAGATTGCTGCAGTGTCATTCTTT
ATTTGCCACCAATTTTTTAGATTTAAAACAGTATGAGGATGCCATCTCACATTTTCAAAAAGCTTATTCTATGGCAGAAG
CTGAAAAGCAGCCCCAATTAATGGGGAGAACTTTGTACAATATCGGGCTTTGTAAAAACAGCCAAAGCCAATATGAGGAT
GCCATACCTTATTTCAAAAGAGCAATAGCTGTTTTTGAAGAATCAAATATTCTTCCTTCCTTACCTCAAGCGTATTTTTT
AATTACACAGATCCATTATAAATTAGGAAAAATAGATAAAGCTCATGAATATCATAGTAAGGGAATGGCTTATTCACAAA
AGGCCGGAGATGTAATATATTTATCAGAGTTTGAATTTTTGAAATCTTTATACTTATCAGGCCCGGATGAAGAAGCAATT
CAAGGATTTTTTGATTTTCTCGAAAGTAAAATGTTGTATGCTGATCTTGAAGATTTCGCTATTGATGTGGCAAAATATTA
TCATGAACGTAAAAATTTTCAAAAAGCTTCTGCTTATTTTTTGAAGGTGGAACAAGTAAGGCAACTTATTCAAGGAGGAG
TGAGTTTGTATGAAATTGAAGTCTAA

Domains

Predicted by InterproScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

• Tetratricopeptide repeat (TPR_12) (223-290)

• Anaphase-promoting complex, cyclosome, subunit 3 (ANAPC3) (132-208)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	100	100	1
rapC	Bacillus subtilis subsp. subtilis str. 168	57.368	99.738	0.572