Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   KJP64_RS07700 Genome accession   NZ_OX419565
Coordinates   1465184..1465759 (+) Length   191 a.a.
NCBI ID   WP_003232378.1    Uniprot ID   -
Organism   Bacillus subtilis isolate NRS6145     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1460184..1470759
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KJP64_RS07670 (NRS6145_07580) dapD 1460370..1461080 (+) 711 WP_003218680.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  KJP64_RS07675 (NRS6145_07585) dapI 1461150..1462274 (+) 1125 WP_032721474.1 N-acetyldiaminopimelate deacetylase -
  KJP64_RS07680 (NRS6145_07590) ykuS 1462336..1462581 (+) 246 WP_003232382.1 YkuS family protein -
  KJP64_RS07685 (NRS6145_07595) mscT 1462618..1463421 (-) 804 WP_003244994.1 small-conductance mechanosensitive channel protein MscT -
  KJP64_RS07690 (NRS6145_07600) ahpA 1463658..1464200 (+) 543 WP_003245371.1 biofilm-specific peroxidase AhpA -
  KJP64_RS07695 (NRS6145_07605) ykuV 1464272..1464718 (+) 447 WP_015252187.1 thiol-disulfide oxidoreductase YkuV -
  KJP64_RS07700 (NRS6145_07610) rok 1465184..1465759 (+) 576 WP_003232378.1 transcriptional regulator Rok Regulator
  KJP64_RS07705 (NRS6145_07615) cse15 1465800..1466765 (-) 966 WP_110109385.1 spore protein Cse15 -
  KJP64_RS07710 (NRS6145_07620) mobA 1466902..1467501 (+) 600 WP_014479670.1 molybdenum cofactor guanylyltransferase -
  KJP64_RS07715 (NRS6145_07625) moeB 1467552..1468571 (+) 1020 WP_032721477.1 molybdopterin-synthase adenylyltransferase MoeB -
  KJP64_RS07720 (NRS6145_07630) glp 1468589..1469881 (+) 1293 WP_029317736.1 gephyrin-like molybdotransferase Glp -
  KJP64_RS07725 (NRS6145_07635) mobB 1469842..1470363 (+) 522 WP_003232370.1 molybdopterin-guanine dinucleotide biosynthesis protein B -

Sequence

Protein


Download         Length: 191 a.a.        Molecular weight: 21839.85 Da        Isoelectric Point: 9.8633

>NTDB_id=1157155 KJP64_RS07700 WP_003232378.1 1465184..1465759(+) (rok) [Bacillus subtilis isolate NRS6145]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDRNGSPSEIKKDFRSEKKPDSLPVLAELAAQEIRSYQPQS
QQQSVQPQLQSISSLPAGIPDGTTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFMQ
SLIKMYPEVKKPYRGQYILEGEIESAESANE

Nucleotide


Download         Length: 576 bp        

>NTDB_id=1157155 KJP64_RS07700 WP_003232378.1 1465184..1465759(+) (rok) [Bacillus subtilis isolate NRS6145]
ATGTTTAATGAAAGAGAAGCTTTGCGCTTGCGGTTAGAACAATTAAATGAAGCTGAAGTGAAAGTCATTCGTGAATATCA
AATTGAACGTGATAAAATATACGCAAAATTAAGAGAGCTGGACAGAAATGGAAGCCCTTCCGAAATCAAAAAGGATTTCC
GTTCTGAAAAAAAACCTGACTCTCTGCCGGTTCTCGCTGAGCTTGCGGCTCAGGAAATCAGAAGCTATCAGCCGCAATCA
CAGCAGCAGTCTGTTCAGCCTCAGCTTCAATCTATTTCCTCTCTTCCTGCCGGTATACCAGACGGAACAACACGAAGAAG
AAGAGGAACGGCAAGACCGGGATCAAAAGCAGCTAAGCTGCGTGAAGCTGCTATTAAAACATTAAAACGCCACAACGCGG
CGATTAAGAGCTCGGAGCTTCAAAAAGAGATTGAAAAAGAAAGCGGTCTTGAAATCCCTAATATGACAACATTTATGCAA
AGCTTAATTAAAATGTACCCGGAAGTGAAAAAGCCATATCGCGGGCAGTACATTTTAGAGGGTGAAATCGAATCTGCAGA
ATCAGCAAATGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment