Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   KJP64_RS07585 Genome accession   NZ_OX419565
Coordinates   1445955..1446419 (-) Length   154 a.a.
NCBI ID   WP_003232406.1    Uniprot ID   G4NVM0
Organism   Bacillus subtilis isolate NRS6145     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1440955..1451419
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KJP64_RS07565 (NRS6145_07475) kinA 1441422..1443242 (+) 1821 WP_015252197.1 sporulation histidine kinase KinA -
  KJP64_RS07570 (NRS6145_07480) dapX 1443252..1444433 (-) 1182 WP_015252196.1 aminotransferase A -
  KJP64_RS07575 (NRS6145_07485) - 1444635..1444796 (-) 162 WP_003245246.1 hypothetical protein -
  KJP64_RS07580 (NRS6145_07490) cheV 1445000..1445911 (+) 912 WP_014476655.1 chemotaxis protein CheV -
  KJP64_RS07585 (NRS6145_07495) kre 1445955..1446419 (-) 465 WP_003232406.1 YkyB family protein Regulator
  KJP64_RS07590 (NRS6145_07500) ykuC 1446545..1447837 (-) 1293 WP_017697269.1 MFS transporter -
  KJP64_RS07595 (NRS6145_07505) ltdD 1447913..1448407 (-) 495 WP_072557193.1 L,D-transpeptidase family protein -
  KJP64_RS07600 (NRS6145_07510) ppeE 1448464..1449324 (-) 861 WP_017697271.1 metallophosphoesterase -
  KJP64_RS07605 (NRS6145_07515) fadH 1449467..1450231 (+) 765 WP_003232398.1 2,4-dienoyl-CoA reductase -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17895.71 Da        Isoelectric Point: 10.3545

>NTDB_id=1157154 KJP64_RS07585 WP_003232406.1 1445955..1446419(-) (kre) [Bacillus subtilis isolate NRS6145]
MDDHAYTKDLQPTVENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSKNPRFSQQQSDVLISIGD
YYFHMPPTKEDFEHLPHLGTLNQSYRNPKAQMSLTKAKHLLQEYVGMKEKPLVPNRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=1157154 KJP64_RS07585 WP_003232406.1 1445955..1446419(-) (kre) [Bacillus subtilis isolate NRS6145]
ATGGACGACCATGCATATACGAAAGATCTGCAGCCAACCGTAGAAAATCTTTCAAAAGCAGTTTACACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTATATCTGCTGAAAAAACGGGCTTTGCAAAAGCTTGTCAAAGAAGGTAAAG
GAAAGAAAATAGGGCTTCATTTTTCAAAAAATCCAAGGTTCAGCCAACAGCAATCGGACGTGCTTATCTCAATCGGAGAC
TACTATTTTCACATGCCTCCAACTAAAGAAGACTTCGAACATCTTCCGCATTTAGGTACACTTAATCAATCGTACCGAAA
TCCTAAAGCTCAAATGTCTTTAACAAAAGCGAAACACCTATTGCAAGAATATGTCGGCATGAAAGAAAAGCCGCTAGTGC
CAAATCGCCAGCAGCCAGCTTACCATAAGCCGGTCTTTAAAAAACTTGGCGAGAGTTACTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(14-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NVM0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment