Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   KJP48_RS07675 Genome accession   NZ_OX419564
Coordinates   1462084..1462659 (+) Length   191 a.a.
NCBI ID   WP_003232378.1    Uniprot ID   -
Organism   Bacillus subtilis isolate NRS6127     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1457084..1467659
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KJP48_RS07645 (NRS6127_07560) dapD 1457270..1457980 (+) 711 WP_003218680.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  KJP48_RS07650 (NRS6127_07565) dapI 1458050..1459174 (+) 1125 WP_021479383.1 N-acetyldiaminopimelate deacetylase -
  KJP48_RS07655 (NRS6127_07570) ykuS 1459236..1459481 (+) 246 WP_003232382.1 YkuS family protein -
  KJP48_RS07660 (NRS6127_07575) mscT 1459518..1460321 (-) 804 WP_003244994.1 small-conductance mechanosensitive channel protein MscT -
  KJP48_RS07665 (NRS6127_07580) ahpA 1460558..1461100 (+) 543 WP_003245371.1 biofilm-specific peroxidase AhpA -
  KJP48_RS07670 (NRS6127_07585) ykuV 1461172..1461618 (+) 447 WP_015252187.1 thiol-disulfide oxidoreductase YkuV -
  KJP48_RS07675 (NRS6127_07590) rok 1462084..1462659 (+) 576 WP_003232378.1 transcriptional regulator Rok Regulator
  KJP48_RS07680 (NRS6127_07595) cse15 1462700..1463665 (-) 966 WP_029727015.1 spore protein Cse15 -
  KJP48_RS07685 (NRS6127_07600) mobA 1463802..1464401 (+) 600 WP_021479380.1 molybdenum cofactor guanylyltransferase -
  KJP48_RS07690 (NRS6127_07605) moeB 1464452..1465471 (+) 1020 WP_017696813.1 molybdopterin-synthase adenylyltransferase MoeB -
  KJP48_RS07695 (NRS6127_07610) glp 1465489..1466781 (+) 1293 WP_153940190.1 gephyrin-like molybdotransferase Glp -
  KJP48_RS07700 (NRS6127_07615) mobB 1466742..1467263 (+) 522 WP_029725925.1 molybdopterin-guanine dinucleotide biosynthesis protein B -

Sequence

Protein


Download         Length: 191 a.a.        Molecular weight: 21839.85 Da        Isoelectric Point: 9.8633

>NTDB_id=1157071 KJP48_RS07675 WP_003232378.1 1462084..1462659(+) (rok) [Bacillus subtilis isolate NRS6127]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDRNGSPSEIKKDFRSEKKPDSLPVLAELAAQEIRSYQPQS
QQQSVQPQLQSISSLPAGIPDGTTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFMQ
SLIKMYPEVKKPYRGQYILEGEIESAESANE

Nucleotide


Download         Length: 576 bp        

>NTDB_id=1157071 KJP48_RS07675 WP_003232378.1 1462084..1462659(+) (rok) [Bacillus subtilis isolate NRS6127]
ATGTTTAATGAAAGAGAAGCTTTGCGCTTGCGGTTAGAACAATTAAATGAAGCTGAAGTGAAAGTCATTCGTGAATATCA
AATTGAACGTGATAAAATATACGCAAAATTAAGAGAGCTGGACAGAAATGGAAGCCCTTCCGAAATCAAAAAGGATTTCC
GTTCTGAAAAAAAACCTGACTCTCTGCCGGTTCTCGCTGAGCTTGCGGCTCAGGAAATCAGAAGCTATCAGCCGCAATCA
CAGCAGCAGTCTGTCCAGCCTCAGCTTCAATCTATTTCCTCTCTTCCTGCCGGTATACCAGACGGAACAACACGAAGAAG
AAGAGGAACGGCAAGACCGGGATCAAAAGCAGCTAAGCTGCGTGAAGCTGCTATTAAAACATTAAAACGCCACAACGCGG
CGATTAAGAGCTCGGAGCTTCAAAAAGAGATTGAAAAAGAAAGCGGTCTTGAAATCCCTAATATGACAACGTTTATGCAA
AGCTTAATTAAAATGTACCCGGAAGTGAAAAAGCCATATCGCGGGCAGTACATTTTAGAGGGTGAAATCGAATCTGCAGA
ATCAGCAAATGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment