Detailed information NTG1157035

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: KJP66_RS20100
• Genome accession: NZ_OX419563
• Coordinates: 3845732..3846877 (+)
• Length: 381 a.a.
• NCBI ID: WP_003227549.1
• Uniprot ID: -
• Organism: Bacillus subtilis isolate NRS6153
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 3840732..3851877

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KJP66_RS20080 (NRS6153_19905)	albF	3840748..3842028 (+)	1281	WP_003242974.1	pitrilysin family protein	-
KJP66_RS20085 (NRS6153_19910)	albG	3842025..3842726 (+)	702	WP_003243391.1	antilisterial bacteriocin subtilosin biosynthesis protein AlbG	-
KJP66_RS20090 (NRS6153_19915)	ywhL	3842732..3844108 (-)	1377	WP_003244415.1	YncE family protein	-
KJP66_RS20095 (NRS6153_19920)	ywhK	3844147..3845502 (-)	1356	WP_003227552.1	YncE family protein	-
KJP66_RS22065	-	3845499..3845729 (-)	231	WP_009968328.1	hypothetical protein	-
KJP66_RS20100 (NRS6153_19925)	rapF	3845732..3846877 (+)	1146	WP_003227549.1	response regulator aspartate phosphatase RapF	Regulator
KJP66_RS20105 (NRS6153_19930)	phrF	3846861..3846980 (+)	120	WP_009968329.1	phosphatase RapF inhibitor PhrF	Regulator
KJP66_RS20110 (NRS6153_19935)	ywhH	3847079..3847552 (+)	474	WP_003227547.1	YbaK/EbsC family protein	-
KJP66_RS20115 (NRS6153_19940)	speB	3847584..3848456 (-)	873	WP_003227545.1	agmatinase	-
KJP66_RS20120 (NRS6153_19945)	speE	3848517..3849347 (-)	831	WP_003227543.1	spermidine synthase	-
KJP66_RS20125 (NRS6153_19950)	pbpG	3849549..3851624 (+)	2076	WP_003227540.1	transglycosylase domain-containing protein	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 45609.09 Da
• Isoelectric Point: 5.1503

>NTDB_id=1157035 KJP66_RS20100 WP_003227549.1 3845732..3846877(+) (rapF) [Bacillus subtilis isolate NRS6153]
MTGVISSSSIGEKINEWYMYIRRFSIPDAEYLRREIKQELDQMEEDQDLHLYYSLMEFRHNLMLEYLEPLEKMRIEEQPR
LSDLLLEIDKKQARLTGLLEYYFNFFRGMYELDQREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYYMKQTYFS
MDYARQAYEIYKEHEAYNIRLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYED
AIPYFKRAIAVFEESNILPSLPQAYFLITQIHYKLGKIDKAHEYHSKGMAYSQKAGDVIYLSEFEFLKSLYLSGPDEEAI
QGFFDFLESKMLYADLEDFAIDVAKYYHERKNFQKASAYFLKVEQVRQLIQGGVSLYEIEV

Nucleotide

• Length: 1146 bp

>NTDB_id=1157035 KJP66_RS20100 WP_003227549.1 3845732..3846877(+) (rapF) [Bacillus subtilis isolate NRS6153]
GTGACAGGTGTCATATCTTCTTCTTCCATCGGAGAAAAGATTAACGAATGGTATATGTACATACGCCGATTCAGCATACC
CGATGCAGAATATTTGCGACGAGAAATCAAGCAAGAGCTGGATCAAATGGAAGAAGATCAAGACCTTCATTTGTACTATT
CACTGATGGAGTTTCGGCACAACCTAATGCTTGAGTACCTTGAACCGTTAGAAAAAATGAGGATTGAGGAACAGCCGAGA
CTGTCTGATCTGCTGCTTGAGATTGATAAAAAACAGGCTCGTTTAACTGGTCTGCTTGAGTACTATTTTAACTTCTTCAG
AGGCATGTACGAGCTGGACCAGCGGGAATATCTGTCGGCTATTAAATTTTTCAAAAAGGCCGAAAGCAAGCTGATATTCG
TTAAGGATCGGATAGAGAAAGCTGAGTTTTTCTTTAAGATGTCTGAATCTTATTACTATATGAAACAAACGTATTTTTCA
ATGGACTATGCACGGCAAGCATATGAAATATACAAAGAACATGAAGCTTATAATATAAGATTGCTGCAGTGTCATTCTTT
ATTTGCCACCAATTTTTTAGATTTAAAACAGTATGAGGATGCCATCTCACATTTTCAAAAAGCTTATTCTATGGCAGAAG
CTGAAAAGCAGCCCCAATTAATGGGGAGAACTTTGTACAATATCGGGCTTTGTAAAAACAGCCAAAGCCAATATGAGGAT
GCCATACCTTATTTCAAAAGAGCAATAGCTGTTTTTGAAGAATCAAATATTCTTCCTTCCTTACCTCAAGCGTATTTTTT
AATTACACAGATCCATTATAAATTAGGAAAAATAGATAAAGCTCATGAATATCATAGTAAGGGAATGGCTTATTCACAAA
AGGCCGGAGATGTAATATATTTATCAGAGTTTGAATTTTTGAAATCTTTATACTTATCAGGCCCGGATGAAGAAGCAATT
CAAGGATTTTTTGATTTTCTCGAAAGTAAAATGTTGTATGCTGATCTTGAAGATTTCGCTATTGATGTGGCAAAATATTA
TCATGAACGTAAAAATTTTCAAAAAGCTTCTGCTTATTTTTTGAAGGTGGAACAAGTAAGGCAACTTATTCAAGGAGGAG
TGAGTTTGTATGAAATTGAAGTCTAA

Domains

Predicted by InterproScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

• Tetratricopeptide repeat (TPR_12) (223-290)

• Anaphase-promoting complex, cyclosome, subunit 3 (ANAPC3) (132-208)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	100	100	1
rapC	Bacillus subtilis subsp. subtilis str. 168	57.368	99.738	0.572