Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   C163_RS23965 Genome accession   NZ_CP007012
Coordinates   5444581..5444982 (-) Length   133 a.a.
NCBI ID   WP_003257770.1    Uniprot ID   A0AAI8FHY9
Organism   Pseudomonas sp. FGI182     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 5439581..5449982
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C163_RS23950 (C163_24360) - 5441551..5443605 (-) 2055 WP_025340904.1 methyl-accepting chemotaxis protein -
  C163_RS23955 (C163_24365) - 5443617..5444171 (-) 555 WP_025340905.1 chemotaxis protein CheW -
  C163_RS23960 (C163_24370) pilH 5444168..5444533 (-) 366 WP_025340906.1 twitching motility response regulator PilH -
  C163_RS23965 (C163_24375) pilG 5444581..5444982 (-) 402 WP_003257770.1 PleD family two-component system response regulator Regulator
  C163_RS23970 (C163_24380) gshB 5445281..5446234 (+) 954 WP_025340907.1 glutathione synthase -
  C163_RS23975 (C163_24385) - 5446326..5447231 (+) 906 WP_013974528.1 energy transducer TonB -
  C163_RS23980 (C163_24390) - 5447403..5447972 (+) 570 WP_015272081.1 YqgE/AlgH family protein -
  C163_RS23985 (C163_24395) ruvX 5447972..5448409 (+) 438 WP_013974530.1 Holliday junction resolvase RuvX -
  C163_RS23990 (C163_24400) pyrR 5448459..5448977 (+) 519 WP_025340908.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -

Sequence

Protein


Download         Length: 133 a.a.        Molecular weight: 14576.82 Da        Isoelectric Point: 6.4772

>NTDB_id=115701 C163_RS23965 WP_003257770.1 5444581..5444982(-) (pilG) [Pseudomonas sp. FGI182]
MEQPLKVMVIDDSRTIRRTAQMLLGEAGCEVITASDGFDALAKIVDHQPSIIFVDVLMPRLDGYQTCAVIKHNSAFKDTP
VILLSSRDGLFDKARGRVVGSDQFLTKPFSKEELLDAIRAHVPGFAAAQQHAP

Nucleotide


Download         Length: 402 bp        

>NTDB_id=115701 C163_RS23965 WP_003257770.1 5444581..5444982(-) (pilG) [Pseudomonas sp. FGI182]
ATGGAACAACCCCTGAAGGTGATGGTGATCGACGATTCGCGCACGATCCGCCGCACCGCGCAGATGTTGCTCGGTGAAGC
GGGCTGCGAGGTGATCACCGCCAGCGATGGCTTCGATGCCCTGGCCAAGATCGTCGACCACCAGCCCAGCATCATCTTCG
TCGATGTGTTGATGCCGCGCCTGGACGGCTACCAGACCTGCGCGGTGATCAAGCACAACAGTGCCTTCAAGGACACCCCG
GTCATTCTGCTGTCGTCACGTGACGGCCTGTTCGACAAGGCCCGCGGCCGGGTGGTCGGCTCCGACCAGTTCCTGACCAA
ACCGTTCAGCAAGGAAGAACTGCTCGACGCGATCCGCGCCCACGTGCCCGGTTTTGCCGCAGCCCAACAACACGCACCCT
GA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(7-119)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

70

90.226

0.632

Multiple sequence alignment