Detailed information    

insolico Bioinformatically predicted

Overview


Name   coiA   Type   Machinery gene
Locus tag   KJP66_RS06760 Genome accession   NZ_OX419563
Coordinates   1284209..1285360 (+) Length   383 a.a.
NCBI ID   WP_003245839.1    Uniprot ID   A0AAE2VB70
Organism   Bacillus subtilis isolate NRS6153     
Function   homologous recombination; DNA uptake (predicted from homology)   
Homologous recombination DNA binding and uptake

Genomic Context


Location: 1279209..1290360
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KJP66_RS06725 (NRS6153_06670) yjbB 1279881..1281098 (+) 1218 WP_010886478.1 MFS transporter -
  KJP66_RS06730 (NRS6153_06675) yjbC 1281262..1281840 (+) 579 WP_003244921.1 GNAT family N-acetyltransferase -
  KJP66_RS06735 (NRS6153_06680) spx 1282021..1282416 (+) 396 WP_003245483.1 transcriptional regulator Spx -
  KJP66_RS06740 (NRS6153_06685) yjbE 1282459..1283115 (-) 657 WP_003232944.1 TerC family protein -
  KJP66_RS06745 - 1283285..1283425 (+) 141 WP_119122854.1 hypothetical protein -
  KJP66_RS06750 (NRS6153_06690) mecA 1283392..1284048 (+) 657 WP_003245194.1 adaptor protein MecA Regulator
  KJP66_RS06755 - 1284043..1284165 (-) 123 WP_003245684.1 hypothetical protein -
  KJP66_RS06760 (NRS6153_06695) coiA 1284209..1285360 (+) 1152 WP_003245839.1 competence protein CoiA Machinery gene
  KJP66_RS06765 (NRS6153_06700) pepF 1285590..1287419 (+) 1830 WP_003245178.1 oligoendopeptidase F -
  KJP66_RS06770 (NRS6153_06705) - 1287457..1287624 (-) 168 WP_003244944.1 hypothetical protein -
  KJP66_RS06775 (NRS6153_06720) spxH 1287938..1288837 (-) 900 WP_003245184.1 protease adaptor protein SpxH -
  KJP66_RS06780 (NRS6153_06725) yjbI 1288834..1289232 (-) 399 WP_003232928.1 group 2 truncated hemoglobin YjbI -
  KJP66_RS06785 (NRS6153_06730) cwlQ 1289487..1290221 (-) 735 WP_003245645.1 bifunctional muramidase/murein lytic transglycosylase -

Sequence


Protein


Download         Length: 383 a.a.        Molecular weight: 44755.85 Da        Isoelectric Point: 10.0034

>NTDB_id=1156985 KJP66_RS06760 WP_003245839.1 1284209..1285360(+) (coiA) [Bacillus subtilis isolate NRS6153]
MFSAVTEDGQMFHLLGAQQNQKLKRRRFFCPVCGGELAVKLGLQKAPHFAHKQNKSCAIDIEPESAYHLEGKRQLYVWLK
TQRASPILEPYIRTINQRPDVMARIKEHMLAVEYQCATIAPDVFQKRTEGFKQEGIIPQWIMGYSRLKRTASSFYQLSTF
HWQFINASPYRELICYCPERRSFLRLSHIIPFYTNHSYSSVQTIPIHRAGAGDLFFTEPKPSIQYSGWTKAIHRFRHKPH
RFNSKETNRLRLLFYEKRQTPFSFLPTEVFVPVRKGAVFKSPVFVWQGFLYLFMTDLGGKRAPIRFSAVLQQCKLHIHNK
NIALRSECSEECLSEAVKQYIDFLCKKGFLRETQKEVYVLNQPAGGIHSMQDLIERDRSCFIE

Nucleotide


Download         Length: 1152 bp        

>NTDB_id=1156985 KJP66_RS06760 WP_003245839.1 1284209..1285360(+) (coiA) [Bacillus subtilis isolate NRS6153]
TTGTTTAGTGCTGTGACTGAAGACGGCCAAATGTTTCACCTTCTAGGCGCTCAGCAAAACCAGAAATTAAAGCGGAGACG
GTTCTTCTGTCCGGTATGCGGGGGAGAGCTAGCTGTGAAGCTCGGACTTCAAAAAGCGCCGCATTTTGCCCATAAACAGA
ACAAGTCCTGCGCCATAGACATCGAGCCGGAAAGCGCCTACCACTTAGAAGGAAAAAGACAGCTGTATGTATGGCTGAAA
ACGCAACGGGCTTCACCAATATTGGAGCCGTATATAAGGACAATCAACCAAAGACCGGACGTCATGGCAAGAATCAAGGA
GCATATGCTTGCTGTTGAATATCAATGCGCCACTATCGCTCCAGATGTCTTTCAAAAGCGGACAGAGGGCTTCAAACAAG
AAGGAATCATCCCGCAGTGGATTATGGGATACAGCCGCTTAAAACGGACTGCTTCGTCCTTTTATCAGCTTTCAACTTTT
CATTGGCAGTTTATCAATGCAAGTCCATACAGAGAACTGATATGTTATTGTCCTGAAAGGCGTTCTTTTCTCCGGCTCAG
CCACATCATTCCATTCTACACAAACCATTCTTATTCCTCAGTCCAAACGATCCCTATCCATCGGGCAGGTGCAGGCGATC
TTTTTTTCACTGAACCGAAACCCTCAATTCAATATTCAGGCTGGACGAAAGCGATTCACCGTTTTCGCCATAAACCCCAT
CGGTTTAACTCAAAGGAAACAAATCGCCTTAGGCTGCTGTTTTATGAGAAACGACAGACGCCTTTTTCTTTTCTGCCGAC
TGAAGTGTTTGTTCCTGTTAGAAAAGGGGCAGTTTTTAAGAGTCCGGTTTTTGTGTGGCAGGGGTTTCTTTATTTGTTTA
TGACGGATCTTGGAGGTAAACGTGCGCCAATTCGTTTTTCAGCCGTTTTGCAGCAGTGCAAACTGCACATTCATAATAAG
AACATTGCACTCAGGTCCGAATGCAGCGAAGAGTGTCTTTCAGAAGCGGTTAAACAGTATATTGATTTTTTGTGCAAGAA
GGGATTTTTAAGGGAGACTCAGAAAGAAGTATATGTGCTGAATCAGCCTGCAGGAGGCATACACTCCATGCAGGATCTCA
TAGAAAGAGACCGCAGCTGTTTTATAGAATGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  coiA Bacillus subtilis subsp. subtilis str. 168

100

97.389

0.974


Multiple sequence alignment