Detailed information NTG1156980

Bioinformatically predicted

Overview

• Name: med
• Type: Regulator
• Locus tag: KJP66_RS06635
• Genome accession: NZ_OX419563
• Coordinates: 1260952..1261905 (+)
• Length: 317 a.a.
• NCBI ID: WP_003245494.1
• Uniprot ID: A0AAE2SG99
• Organism: Bacillus subtilis isolate NRS6153
• Function: regulation of regulators (predicted from homology) Competence regulation

Genomic Context

Location: 1255952..1266905

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KJP66_RS06610 (NRS6153_06555)	argF	1257784..1258743 (+)	960	WP_003232980.1	ornithine carbamoyltransferase	-
KJP66_RS06615 (NRS6153_06560)	yjzC	1258829..1259008 (+)	180	WP_003245356.1	YjzC family protein	-
KJP66_RS06620 (NRS6153_06565)	yjzD	1259054..1259239 (-)	186	WP_003245236.1	DUF2929 domain-containing protein	-
KJP66_RS06625 (NRS6153_06570)	-	1259488..1260222 (+)	735	WP_003245223.1	hypothetical protein	-
KJP66_RS06630 (NRS6153_06575)	-	1260304..1260861 (+)	558	WP_003232974.1	hypothetical protein	-
KJP66_RS06635 (NRS6153_06580)	med	1260952..1261905 (+)	954	WP_003245494.1	transcriptional regulator Med	Regulator
KJP66_RS06640 (NRS6153_06585)	comZ	1261920..1262111 (+)	192	WP_003224559.1	ComG operon transcriptional repressor ComZ	Regulator
KJP66_RS06645 (NRS6153_06590)	yjzB	1262141..1262380 (-)	240	WP_003232972.1	spore coat protein YjzB	-
KJP66_RS06650 (NRS6153_06595)	fabH	1262545..1263483 (+)	939	WP_003232971.1	beta-ketoacyl-ACP synthase III	-
KJP66_RS06655 (NRS6153_06600)	fabF	1263506..1264747 (+)	1242	WP_003244890.1	beta-ketoacyl-ACP synthase II	-
KJP66_RS06660 (NRS6153_06605)	yjaZ	1264823..1265608 (+)	786	WP_003232967.1	DUF2268 domain-containing protein	-
KJP66_RS06665 (NRS6153_06610)	appD	1265800..1266786 (+)	987	WP_003232965.1	oligopeptide ABC transporter ATP-binding protein AppD	-

Sequence

Protein

• Length: 317 a.a.
• Molecular weight: 35310.80 Da
• Isoelectric Point: 4.5457

>NTDB_id=1156980 KJP66_RS06635 WP_003245494.1 1260952..1261905(+) (med) [Bacillus subtilis isolate NRS6153]
MITRLVMIFSVLLLLSGCGQTPFKGKIEKVGMLFPDTINDLVWGTKGYKGLLNIQSKYNVDVYYKEGVKTEEDIINAIED
FHKRGVNLLYGHGSEYAEVFNLVGEDYPDMEFVISNAKAKADNVTSVHFSGEAMGFFGGMTAAHMSKTNQVGVIASFTWQ
PEVDGFIKGAKYENPDIEVNTKYTDHWDDDTTAVKLYQKMKNEGADVVYPAGDGYNVPVIQQIKKDGLYAIGYVTDQSDL
GENTVLTSTVQNVDKAYEIIAEQFNKGTLEGGDHYYDLNTGVVEMGTFSPLVDQDFQQRIAKLIKTYNKTGELPKNE

Nucleotide

• Length: 954 bp

>NTDB_id=1156980 KJP66_RS06635 WP_003245494.1 1260952..1261905(+) (med) [Bacillus subtilis isolate NRS6153]
TTGATCACAAGGCTTGTCATGATCTTTTCTGTCCTCCTTTTATTGAGTGGATGTGGACAAACTCCGTTCAAAGGAAAAAT
TGAGAAGGTCGGCATGCTCTTTCCTGATACGATTAATGACCTCGTATGGGGCACAAAAGGGTATAAAGGATTACTGAATA
TACAATCCAAATACAATGTGGACGTCTATTATAAAGAAGGCGTTAAAACAGAAGAAGATATCATAAATGCGATTGAGGAT
TTTCATAAGAGGGGCGTCAATCTGCTCTACGGCCATGGGAGTGAATATGCTGAGGTGTTTAACTTGGTCGGCGAAGATTA
TCCAGATATGGAATTCGTCATTTCCAATGCGAAAGCGAAAGCTGATAATGTAACAAGTGTCCATTTTAGCGGGGAAGCAA
TGGGCTTTTTTGGAGGAATGACTGCTGCCCATATGTCGAAAACGAATCAGGTCGGTGTAATTGCTTCCTTTACGTGGCAG
CCTGAGGTTGACGGTTTTATCAAAGGGGCCAAGTATGAAAATCCGGATATAGAGGTAAATACGAAATATACGGATCATTG
GGATGATGATACAACAGCAGTAAAGCTTTATCAGAAAATGAAGAACGAAGGCGCGGATGTTGTGTATCCCGCCGGAGACG
GGTATAATGTTCCTGTTATTCAGCAAATCAAAAAAGACGGTCTTTATGCCATAGGCTACGTCACAGATCAATCGGATCTG
GGCGAGAATACCGTATTAACCAGCACGGTGCAAAATGTGGACAAGGCCTATGAAATCATTGCTGAACAATTTAATAAAGG
CACCCTTGAGGGCGGCGATCATTACTACGACCTGAACACGGGAGTCGTTGAGATGGGAACATTCAGCCCGCTCGTCGATC
AAGACTTTCAGCAAAGAATCGCCAAGCTGATCAAAACATACAACAAAACAGGCGAGCTGCCAAAAAACGAGTAA

Domains

Predicted by InterproScan.

• ABC transporter substrate-binding protein PnrA-like (Bmp) (27-317)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
med	Bacillus subtilis subsp. subtilis str. 168	100	100	1