Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   KJP66_RS02560 Genome accession   NZ_OX419563
Coordinates   484608..485558 (+) Length   316 a.a.
NCBI ID   WP_003234491.1    Uniprot ID   A0AAE2SHG3
Organism   Bacillus subtilis isolate NRS6153     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 479608..490558
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KJP66_RS02535 (NRS6153_02525) rapC 481067..482215 (+) 1149 WP_003246686.1 response regulator aspartate phosphatase RapC Regulator
  KJP66_RS02540 (NRS6153_02530) phrC 482199..482321 (+) 123 WP_003224994.1 phosphatase RapC inhibitor PhrC Regulator
  KJP66_RS02545 (NRS6153_02535) yczM 482421..482510 (-) 90 WP_015482794.1 YjcZ family sporulation protein -
  KJP66_RS02550 (NRS6153_02540) yczN 482592..482705 (-) 114 WP_003234495.1 YjcZ family sporulation protein -
  KJP66_RS02555 (NRS6153_02545) thrD 482859..484223 (-) 1365 WP_003234493.1 aspartate kinase -
  KJP66_RS02560 (NRS6153_02550) ceuB 484608..485558 (+) 951 WP_003234491.1 petrobactin ABC transporter permease YclN Machinery gene
  KJP66_RS02565 (NRS6153_02555) yclO 485551..486498 (+) 948 WP_003246705.1 petrobactin ABC transporter permease YclO -
  KJP66_RS02570 (NRS6153_02560) yclP 486492..487250 (+) 759 WP_003234487.1 petrobactin ABC transporter ATP-binding protein YclP -
  KJP66_RS02575 (NRS6153_02565) yclQ 487272..488225 (+) 954 WP_003246619.1 petrobactin ABC transporter substrate-binding protein YclQ -
  KJP66_RS02580 (NRS6153_02570) ycnB 488272..489690 (-) 1419 WP_003246604.1 MDR family MFS transporter -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34899.33 Da        Isoelectric Point: 9.9364

>NTDB_id=1156965 KJP66_RS02560 WP_003234491.1 484608..485558(+) (ceuB) [Bacillus subtilis isolate NRS6153]
MKLRYLFILLIILAVTSVFIGVEDLSPLDLFDLSKQEASTLFASRLPRLISIVIAGLSMSICGLIMQQISRNKFVSPTTA
GTMDWARLGILISLLLFTSASPLIKMLVAFVFALAGNFLFMKILERIKFNDTIFIPLVGLMLGNIVSSIATFIAYKYDLI
QNVSSWLQGDFSLVVKGRYELLYLSIPLVIIAYVYADKFTLAGMGESFSVNLGLKYKRVVNIGLIIVSLITSLVILTVGM
LPFLGLIIPNIVSIYRGDNLKSSLPHTVLLGAVFVLFCDILGRIIIFPYEISIGLMVGIIGSGIFLFMLLRRKAYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=1156965 KJP66_RS02560 WP_003234491.1 484608..485558(+) (ceuB) [Bacillus subtilis isolate NRS6153]
ATGAAGCTACGTTACTTATTTATTCTACTTATCATATTAGCAGTCACATCTGTATTTATCGGTGTAGAAGATCTGTCGCC
GCTTGATCTCTTCGATTTAAGCAAACAAGAGGCGTCAACGCTGTTTGCAAGCCGTTTGCCGCGATTGATCAGCATTGTCA
TTGCGGGATTAAGCATGAGCATCTGCGGTTTGATTATGCAGCAGATCAGCAGAAATAAATTCGTGTCACCGACGACGGCG
GGCACGATGGATTGGGCGAGGCTCGGCATTTTAATTTCCTTGCTGCTGTTTACATCCGCCAGTCCTTTAATCAAAATGCT
GGTCGCGTTTGTCTTTGCCCTTGCAGGAAATTTTCTGTTTATGAAAATCCTTGAAAGAATCAAGTTTAACGACACCATCT
TTATTCCGCTTGTCGGTTTAATGCTCGGGAATATCGTCAGTTCAATCGCGACATTTATCGCATATAAATATGACTTGATC
CAGAATGTGTCATCATGGCTGCAGGGAGACTTCTCTTTAGTCGTGAAAGGAAGATACGAGCTTCTTTATCTGAGTATTCC
GCTCGTCATCATTGCCTATGTGTATGCGGATAAATTCACATTGGCCGGTATGGGTGAAAGCTTTTCTGTCAACCTCGGCC
TCAAGTATAAACGGGTTGTGAACATCGGGCTCATTATCGTGTCCCTGATCACGTCTCTTGTCATTTTGACTGTCGGTATG
CTGCCGTTTCTCGGTTTAATCATCCCGAATATTGTATCGATTTACAGAGGAGACAATCTGAAGAGCAGCCTGCCGCATAC
TGTGCTGTTGGGAGCGGTTTTTGTGCTGTTTTGCGATATACTGGGCAGAATCATTATCTTCCCTTATGAAATCTCGATTG
GCCTGATGGTCGGAATCATCGGCAGCGGCATTTTCCTGTTTATGCTGTTAAGGAGAAAAGCCTATGCGTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

52.215

100

0.522

Multiple sequence alignment