Detailed information    

insolico Bioinformatically predicted

Overview

Name   nin/comJ   Type   Regulator
Locus tag   KJP66_RS02345 Genome accession   NZ_OX419563
Coordinates   423967..424365 (-) Length   132 a.a.
NCBI ID   WP_003246342.1    Uniprot ID   A0AAE2SGH7
Organism   Bacillus subtilis isolate NRS6153     
Function   represses the expression of nucA (predicted from homology)   
Competence regulation

Genomic Context

Location: 418967..429365
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KJP66_RS02315 (NRS6153_02315) yckA 419543..420223 (-) 681 WP_003234624.1 amino acid ABC transporter permease -
  KJP66_RS02320 (NRS6153_02320) yckB 420233..421096 (-) 864 WP_009966510.1 transporter substrate-binding domain-containing protein -
  KJP66_RS02325 - 421258..421455 (+) 198 WP_119122841.1 hypothetical protein -
  KJP66_RS02330 (NRS6153_02335) yckC 421474..421929 (+) 456 WP_003246356.1 RDD family protein -
  KJP66_RS02335 (NRS6153_02340) yckD 422011..422343 (+) 333 WP_003246247.1 YckD family protein -
  KJP66_RS02340 (NRS6153_02345) bglC 422497..423930 (+) 1434 WP_003246242.1 6-phospho-beta-glucosidase -
  KJP66_RS02345 (NRS6153_02350) nin/comJ 423967..424365 (-) 399 WP_003246342.1 DNA-entry nuclease inhibitor Regulator
  KJP66_RS02350 (NRS6153_02355) nucA/comI 424392..424841 (-) 450 WP_003246436.1 DNA-entry nuclease Machinery gene
  KJP66_RS02355 (NRS6153_02360) tlpC 425009..426730 (-) 1722 WP_003246498.1 methyl-accepting chemotaxis protein TlpC -
  KJP66_RS02360 (NRS6153_02365) hxlB 426841..427398 (-) 558 WP_003246343.1 6-phospho-3-hexuloisomerase -
  KJP66_RS02365 (NRS6153_02370) hxlA 427404..428036 (-) 633 WP_003246452.1 3-hexulose-6-phosphate synthase -
  KJP66_RS02370 (NRS6153_02375) hxlR 428269..428631 (+) 363 WP_003246265.1 transcriptional activator HxlR -

Sequence

Protein


Download         Length: 132 a.a.        Molecular weight: 14996.95 Da        Isoelectric Point: 4.8991

>NTDB_id=1156960 KJP66_RS02345 WP_003246342.1 423967..424365(-) (nin/comJ) [Bacillus subtilis isolate NRS6153]
MIKSWKPQELSISYHQFTVFQKDSTPPVMDWTDEAIEKGYAAADGAISFEAQRNTKAFILFRLNSSETVNSYEKKVTVPF
HVTENGIHIESIMSKRLSFDLPKGDYQLTCWTVPAEMSDLHADTYIIDAVSV

Nucleotide


Download         Length: 399 bp        

>NTDB_id=1156960 KJP66_RS02345 WP_003246342.1 423967..424365(-) (nin/comJ) [Bacillus subtilis isolate NRS6153]
TTGATCAAATCATGGAAGCCGCAAGAACTTTCGATTTCATATCATCAATTTACTGTATTTCAAAAGGATTCTACACCTCC
TGTAATGGATTGGACTGACGAAGCGATTGAAAAAGGATATGCTGCGGCAGACGGAGCCATTTCCTTTGAGGCACAGCGAA
ATACAAAGGCCTTTATTCTTTTTCGCCTGAACAGTTCAGAAACAGTAAACTCCTACGAAAAAAAAGTGACTGTTCCTTTT
CATGTCACAGAAAACGGAATTCATATTGAAAGCATCATGTCTAAAAGACTGTCCTTTGATCTGCCTAAAGGAGACTATCA
ATTGACATGCTGGACTGTGCCGGCTGAAATGTCAGATTTGCACGCCGACACTTATATTATTGATGCTGTTTCTGTGTAA

Domains

Predicted by InterproScan.

Competence protein J (ComJ) (ComJ)

(9-129)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  nin/comJ Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment