Detailed information    

insolico Bioinformatically predicted

Overview


Name   abrB   Type   Regulator
Locus tag   KJP75_RS07845 Genome accession   NZ_OX419560
Coordinates   1496110..1496388 (+) Length   92 a.a.
NCBI ID   WP_003244728.1    Uniprot ID   A0A199WGU6
Organism   Bacillus subtilis isolate NRS6132     
Function   repression of comK; repression of rok (predicted from homology)   
Competence regulation

Genomic Context


Location: 1491110..1501388
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KJP75_RS07825 (NRS6132_07755) - 1492298..1493209 (+) 912 WP_038427635.1 ketopantoate reductase family protein -
  KJP75_RS07830 (NRS6132_07760) ampS 1493243..1494475 (-) 1233 WP_003232341.1 aminopeptidase -
  KJP75_RS07835 (NRS6132_07765) ykpC 1494584..1494718 (-) 135 WP_003238865.1 protein YkpC -
  KJP75_RS07840 (NRS6132_07770) mreBH 1494819..1495826 (-) 1008 WP_003245743.1 cell shape-determining protein MreBH -
  KJP75_RS07845 (NRS6132_07775) abrB 1496110..1496388 (+) 279 WP_003244728.1 transcriptional regulator AbhA Regulator
  KJP75_RS07850 (NRS6132_07780) kinC 1496578..1497864 (+) 1287 WP_021479369.1 two-component sensor histidine kinase KinC -
  KJP75_RS07855 (NRS6132_07785) ykqA 1497880..1498707 (+) 828 WP_046160350.1 gamma-glutamylcyclotransferase -
  KJP75_RS07860 (NRS6132_07790) ktrC 1498770..1499435 (+) 666 WP_003222311.1 Ktr system potassium transporter KtrC -
  KJP75_RS07865 (NRS6132_07795) ade 1499591..1501324 (+) 1734 WP_015715822.1 adenine deaminase -

Sequence


Protein


Download         Length: 92 a.a.        Molecular weight: 10256.07 Da        Isoelectric Point: 5.8808

>NTDB_id=1156907 KJP75_RS07845 WP_003244728.1 1496110..1496388(+) (abrB) [Bacillus subtilis isolate NRS6132]
MKSIGVVRKVDELGRIVMPIELRRALDIAIKDSIEFFVDGDKIILKKYKPHGVCLMTGEITSENKEYGNGKITLSPEGAQ
LLLEEIQAALKE

Nucleotide


Download         Length: 279 bp        

>NTDB_id=1156907 KJP75_RS07845 WP_003244728.1 1496110..1496388(+) (abrB) [Bacillus subtilis isolate NRS6132]
ATGAAATCAATAGGTGTTGTGAGAAAAGTAGATGAATTAGGCCGCATTGTCATGCCGATTGAGTTGAGACGGGCATTGGA
TATTGCCATAAAAGACAGCATTGAGTTTTTTGTTGACGGAGATAAAATTATCTTGAAAAAGTACAAACCTCATGGCGTTT
GTTTAATGACTGGAGAAATCACTTCAGAAAATAAAGAATACGGCAACGGTAAAATTACGCTAAGCCCTGAGGGTGCACAG
CTGCTTCTCGAAGAAATTCAAGCCGCTTTAAAAGAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A199WGU6

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  abrB Bacillus subtilis subsp. subtilis str. 168

58.242

98.913

0.576


Multiple sequence alignment