Detailed information    

insolico Bioinformatically predicted

Overview


Name   coiA   Type   Machinery gene
Locus tag   KJP75_RS06240 Genome accession   NZ_OX419560
Coordinates   1208063..1209214 (+) Length   383 a.a.
NCBI ID   WP_029317613.1    Uniprot ID   -
Organism   Bacillus subtilis isolate NRS6132     
Function   homologous recombination; DNA uptake (predicted from homology)   
Homologous recombination DNA binding and uptake

Genomic Context


Location: 1203063..1214214
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KJP75_RS06205 (NRS6132_06150) yjbB 1203735..1204952 (+) 1218 WP_010886478.1 MFS transporter -
  KJP75_RS06210 (NRS6132_06155) yjbC 1205116..1205694 (+) 579 WP_003224597.1 GNAT family N-acetyltransferase -
  KJP75_RS06215 (NRS6132_06160) spx 1205875..1206270 (+) 396 WP_014476435.1 transcriptional regulator Spx -
  KJP75_RS06220 (NRS6132_06165) yjbE 1206313..1206969 (-) 657 WP_003232944.1 TerC family protein -
  KJP75_RS06225 - 1207139..1207279 (+) 141 WP_119122854.1 hypothetical protein -
  KJP75_RS06230 (NRS6132_06170) mecA 1207246..1207902 (+) 657 WP_003232942.1 adaptor protein MecA Regulator
  KJP75_RS06235 - 1207897..1208019 (-) 123 WP_128473814.1 hypothetical protein -
  KJP75_RS06240 (NRS6132_06175) coiA 1208063..1209214 (+) 1152 WP_029317613.1 competence protein CoiA Machinery gene
  KJP75_RS06245 (NRS6132_06180) pepF 1209444..1211273 (+) 1830 WP_003245178.1 oligoendopeptidase F -
  KJP75_RS06250 (NRS6132_06185) - 1211311..1211478 (-) 168 WP_003244944.1 hypothetical protein -
  KJP75_RS06255 (NRS6132_06195) spxH 1211793..1212692 (-) 900 WP_003245184.1 protease adaptor protein SpxH -
  KJP75_RS06260 (NRS6132_06200) yjbI 1212689..1213087 (-) 399 WP_003232928.1 group 2 truncated hemoglobin YjbI -
  KJP75_RS06265 (NRS6132_06205) cwlQ 1213342..1214076 (-) 735 WP_029726274.1 bifunctional muramidase/murein lytic transglycosylase -

Sequence


Protein


Download         Length: 383 a.a.        Molecular weight: 44859.96 Da        Isoelectric Point: 9.9417

>NTDB_id=1156901 KJP75_RS06240 WP_029317613.1 1208063..1209214(+) (coiA) [Bacillus subtilis isolate NRS6132]
MFSAVTEDGQMFHLLGAQQNQKLKRRRFFCPVCGGELAVKLGLQKAPHFAHKQNKSCSIDIEPESAYHLEGKRQLYVWLK
TQRASPILEPYIRTINQRPDVMARIKEHMLAVEYQCATIAPDVFQKRTEGFKQEGIIPQWIMGYSRLKRTASSFYQLSAF
HWQFINASPYRELICYCPERRSFLRLSHIIPFYTNHSYSSVQTIPIHRAGAGDLFFTEPKPSIQYSGWTKAIHRFRHKPH
RFNSKETNRLRLLFYEKRQTPFSFLPTEVFVPVRKGAVFKSPVFVWQGFLYLFMTDLGGKRAPIRFSAVLQQCKLHIHNK
NIALRFECSEECLSEAVKQYIDFLCKKGFLRETQKEVYVLNQPEGGIHSMQDLIERDRSCFIE

Nucleotide


Download         Length: 1152 bp        

>NTDB_id=1156901 KJP75_RS06240 WP_029317613.1 1208063..1209214(+) (coiA) [Bacillus subtilis isolate NRS6132]
TTGTTTAGTGCTGTGACTGAAGACGGCCAAATGTTTCACCTTCTAGGCGCTCAGCAAAACCAGAAATTAAAGCGGAGACG
GTTCTTCTGTCCGGTATGCGGGGGAGAGCTAGCTGTGAAGCTTGGACTTCAAAAAGCGCCGCATTTTGCCCATAAACAGA
ACAAGTCCTGCTCCATAGACATCGAACCGGAAAGCGCCTACCACTTAGAAGGAAAAAGACAGCTGTATGTATGGCTGAAA
ACGCAACGGGCTTCACCAATATTGGAGCCGTATATAAGGACAATCAACCAAAGACCAGACGTCATGGCAAGGATCAAGGA
GCATATGCTTGCTGTTGAATATCAATGCGCCACTATCGCTCCAGATGTCTTTCAAAAGCGGACAGAGGGCTTCAAACAAG
AAGGAATCATCCCGCAGTGGATTATGGGATACAGCCGCTTAAAACGGACTGCTTCGTCCTTTTATCAGCTTTCAGCTTTT
CATTGGCAGTTTATCAATGCAAGTCCATACAGAGAACTGATATGTTATTGTCCTGAAAGGCGTTCTTTTCTCCGGCTCAG
CCACATCATTCCATTCTACACAAACCATTCTTATTCCTCAGTCCAAACGATCCCTATTCATCGGGCAGGTGCAGGCGATC
TTTTTTTCACTGAACCGAAACCCTCAATTCAATATTCAGGCTGGACGAAAGCGATTCACCGTTTTCGCCATAAACCCCAT
CGGTTTAACTCAAAGGAAACAAATCGCCTTAGGCTGCTGTTTTATGAGAAACGGCAGACGCCTTTTTCTTTTCTGCCGAC
TGAAGTGTTTGTTCCTGTTAGAAAAGGGGCAGTTTTTAAGAGTCCGGTTTTTGTGTGGCAGGGGTTTCTTTATTTGTTTA
TGACGGATCTTGGAGGTAAACGTGCGCCAATTCGTTTTTCAGCCGTTTTGCAGCAGTGCAAACTGCACATTCATAATAAG
AACATTGCACTCAGGTTCGAATGCAGCGAAGAGTGTCTTTCAGAAGCGGTTAAACAGTATATTGATTTTTTGTGCAAGAA
GGGATTTTTAAGGGAGACTCAGAAAGAAGTATATGTGCTGAATCAGCCTGAAGGCGGCATACACTCCATGCAGGATCTCA
TAGAAAGAGACCGCAGCTGTTTTATAGAATGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  coiA Bacillus subtilis subsp. subtilis str. 168

98.928

97.389

0.963


Multiple sequence alignment