Detailed information    

insolico Bioinformatically predicted

Overview


Name   degS   Type   Regulator
Locus tag   KJP68_RS18285 Genome accession   NZ_OX419559
Coordinates   3523311..3524468 (-) Length   385 a.a.
NCBI ID   WP_003227983.1    Uniprot ID   A0A199WDV9
Organism   Bacillus subtilis isolate NRS6099     
Function   phosphorylation of DegU (predicted from homology)   
Competence regulation

Genomic Context


Location: 3518311..3529468
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KJP68_RS18255 (NRS6099_18100) yvyF 3518564..3518983 (-) 420 WP_003227995.1 TIGR03826 family flagellar region protein -
  KJP68_RS18260 (NRS6099_18105) comFC 3519057..3519779 (-) 723 WP_029725992.1 comF operon protein ComFC Machinery gene
  KJP68_RS18265 (NRS6099_18110) comFB 3519743..3520039 (-) 297 WP_015483764.1 late competence protein ComFB -
  KJP68_RS18270 (NRS6099_18115) comFA 3520099..3521490 (-) 1392 WP_029725993.1 ATP-dependent helicase ComFA Machinery gene
  KJP68_RS18275 (NRS6099_18120) fakBA 3521596..3522441 (-) 846 WP_003227986.1 DegV family protein -
  KJP68_RS18280 (NRS6099_18125) degU 3522539..3523228 (-) 690 WP_003219701.1 two-component system response regulator DegU Regulator
  KJP68_RS18285 (NRS6099_18130) degS 3523311..3524468 (-) 1158 WP_003227983.1 two-component sensor histidine kinase DegS Regulator
  KJP68_RS18290 (NRS6099_18135) yvyE 3524685..3525338 (+) 654 WP_003227979.1 YigZ family protein -
  KJP68_RS18295 (NRS6099_18140) tagV 3525338..3526513 (+) 1176 WP_003227977.1 polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase TagV -
  KJP68_RS18300 (NRS6099_18145) tagO 3526586..3527662 (-) 1077 WP_003227975.1 MraY family glycosyltransferase -
  KJP68_RS18305 (NRS6099_18150) tuaH 3527807..3529000 (-) 1194 WP_072692828.1 glycosyltransferase family 1 protein -

Sequence


Protein


Download         Length: 385 a.a.        Molecular weight: 44957.76 Da        Isoelectric Point: 6.2957

>NTDB_id=1156866 KJP68_RS18285 WP_003227983.1 3523311..3524468(-) (degS) [Bacillus subtilis isolate NRS6099]
MNKTKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVQTRHARNRLSEVSR
NFHRFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLREVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGAEDGFQEIKNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGETEDQRLAPQFEVALFRLAQEAVSNALKHSESEEITVKVEI
TKDFVILMIKDNGKGFDLKEAKEKKNKSFGLLGMKERVDLLEGTMTIDSKIGLGTFIMIKVPLSL

Nucleotide


Download         Length: 1158 bp        

>NTDB_id=1156866 KJP68_RS18285 WP_003227983.1 3523311..3524468(-) (degS) [Bacillus subtilis isolate NRS6099]
ATGAATAAAACAAAGATGGATTCCAAAGTGCTGGATTCTATTTTGATGAAGATGCTGAAAACCGTTGACGGGAGCAAGGA
CGAGGTTTTTCAAATCGGGGAGCAGTCACGCCAGCAGTATGAACAGCTGGTCGAAGAACTGAAACAAATTAAACAGCAGG
TGTATGAAGTGATCGAGCTTGGCGATAAACTTGAAGTGCAAACTCGCCATGCGAGAAACCGTTTATCCGAGGTCAGCCGT
AATTTTCATAGATTCAGTGAAGAGGAAATCCGCAATGCTTATGAAAAAGCCCATAAGCTGCAGGTAGAATTGACGATGAT
CCAGCAGCGTGAGAAGCAATTGCGCGAACGGCGGGACGATTTGGAGCGCAGATTGCTAGGGCTTCAGGAAATCATTGAGC
GGTCAGAATCATTAGTAAGCCAAATTACAGTTGTGCTCAACTACTTGAATCAGGATTTGCGCGAAGTTGGACTGCTTCTT
GCTGATGCTCAGGCAAAACAGGATTTCGGCTTAAGAATTATTGAGGCGCAGGAAGAAGAGCGAAAAAGAGTCTCAAGAGA
AATCCATGACGGACCCGCTCAAATGCTGGCGAATGTTATGATGAGATCGGAATTAATCGAGCGGATTTTCCGTGACCGGG
GCGCAGAGGACGGATTCCAAGAAATTAAAAATCTACGCCAAAATGTTCGGAATGCCCTTTACGAAGTGAGAAGGATTATA
TATGATTTAAGACCGATGGCCCTTGATGACCTAGGCCTGATTCCAACTTTAAGAAAATATCTATATACAACCGAGGAATA
TAACGGGAAGGTCAAAATACATTTTCAGTGCATTGGAGAAACAGAGGATCAGAGGCTAGCGCCTCAGTTTGAGGTTGCGC
TCTTCAGGCTCGCACAGGAAGCTGTGTCTAATGCGCTAAAGCATTCTGAATCTGAAGAAATTACAGTCAAAGTTGAGATC
ACAAAGGATTTTGTGATTTTAATGATAAAAGATAACGGTAAAGGGTTCGACCTGAAGGAAGCGAAAGAGAAGAAAAACAA
ATCATTCGGCTTGCTGGGCATGAAAGAAAGAGTAGATTTATTGGAAGGAACGATGACAATAGATTCGAAAATAGGTCTTG
GGACATTTATTATGATTAAGGTTCCGTTATCTCTTTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A199WDV9

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  degS Bacillus subtilis subsp. subtilis str. 168

100

100

1


Multiple sequence alignment