Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   KJP72_RS04590 Genome accession   NZ_OX419557
Coordinates   902193..902987 (+) Length   264 a.a.
NCBI ID   WP_029726844.1    Uniprot ID   -
Organism   Bacillus subtilis isolate NRS6186     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 897193..907987
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KJP72_RS04560 (NRS6186_04560) sxzA 898033..899064 (+) 1032 WP_003233568.1 iron ABC transporter permease -
  KJP72_RS04565 (NRS6186_04565) yfhB 899179..900060 (+) 882 WP_003242763.1 PhzF family phenazine biosynthesis protein -
  KJP72_RS04570 (NRS6186_04570) yfhC 900148..900732 (+) 585 WP_003243940.1 nitroreductase -
  KJP72_RS04575 (NRS6186_04575) yfhD 900771..900962 (-) 192 WP_003233561.1 YfhD family protein -
  KJP72_RS04580 - 901029..901160 (-) 132 WP_041351182.1 YfhE family protein -
  KJP72_RS04585 (NRS6186_04580) yfhF 901193..902104 (-) 912 WP_029726845.1 TIGR01777 family oxidoreductase -
  KJP72_RS04590 (NRS6186_04585) recX 902193..902987 (+) 795 WP_029726844.1 recombination regulator RecX Regulator
  KJP72_RS04595 (NRS6186_04590) yfhH 902989..903309 (+) 321 WP_029726843.1 YfhH family protein -
  KJP72_RS04600 (NRS6186_04595) yfhI 903446..904639 (+) 1194 WP_072692836.1 MFS transporter -
  KJP72_RS04605 (NRS6186_04600) sspK 904671..904823 (-) 153 WP_003223241.1 small, acid-soluble spore protein K -
  KJP72_RS04610 (NRS6186_04605) yfhJ 904948..905217 (+) 270 WP_003243789.1 YfhJ family protein -
  KJP72_RS04615 (NRS6186_04610) yfhK 905362..905880 (+) 519 WP_029726841.1 SH3 domain-containing protein -
  KJP72_RS04620 (NRS6186_04615) spdL 905965..906282 (+) 318 WP_032679045.1 SdpC immunity protein SpdL -
  KJP72_RS04625 (NRS6186_04620) ephM 906284..907144 (+) 861 WP_029726839.1 epoxide hydrolase EphM -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 31047.25 Da        Isoelectric Point: 6.6686

>NTDB_id=1156730 KJP72_RS04590 WP_029726844.1 902193..902987(+) (recX) [Bacillus subtilis isolate NRS6186]
MPFITKISTQKKNTERFNIFLDDKYAFSVDADVLVKFELKKGKELDDLDIIEIQYGDEVKKGFNRALDFLSYRMRSTKEV
EDHLKKKETSPPVIAEVIHRLNDYKYLNDQEFAAAYVSTHKKTNGKGPDVLFRELRAKGIDDDTIKEALSSFSFEDQTRE
AVKHVEKLLKKDKKLSTKEFKQRAQLQLQRKGFSFDVISAAMDQIEYENDEDTEKEALRLHAEKAFRKYRYDGSYESAMK
VKQFLFRKGFSLDLIEQLLQEEEY

Nucleotide


Download         Length: 795 bp        

>NTDB_id=1156730 KJP72_RS04590 WP_029726844.1 902193..902987(+) (recX) [Bacillus subtilis isolate NRS6186]
ATGCCGTTTATTACAAAAATATCAACGCAAAAAAAGAATACGGAACGCTTCAATATTTTTCTGGATGATAAATACGCCTT
CAGCGTGGACGCGGATGTGCTCGTGAAATTTGAGCTCAAGAAGGGAAAAGAACTCGATGATCTTGACATCATTGAAATTC
AATACGGCGATGAAGTGAAGAAAGGCTTCAACCGTGCGCTTGACTTTTTATCCTATCGAATGCGGTCGACGAAAGAGGTC
GAGGACCACTTAAAGAAAAAAGAAACCTCGCCCCCCGTCATTGCGGAAGTCATCCATAGGCTTAACGATTACAAGTACTT
AAACGACCAGGAATTTGCCGCAGCCTATGTCAGCACTCACAAAAAAACAAACGGAAAAGGCCCTGATGTTTTGTTCAGAG
AGCTAAGAGCGAAGGGAATTGATGACGATACAATTAAGGAGGCGCTAAGTTCCTTTTCCTTTGAAGATCAGACAAGAGAA
GCGGTCAAGCATGTTGAAAAGCTTCTCAAAAAAGATAAAAAGCTTTCGACGAAAGAATTCAAACAGCGCGCCCAGCTGCA
GCTTCAGCGCAAGGGCTTCTCATTTGATGTTATCAGCGCGGCGATGGATCAGATTGAATATGAAAATGATGAAGACACGG
AGAAAGAAGCGCTGCGCCTTCACGCGGAAAAAGCGTTTAGAAAATACCGCTATGACGGCTCATATGAAAGCGCCATGAAG
GTCAAACAATTTTTATTCCGCAAAGGATTCTCACTCGATTTAATCGAGCAATTACTGCAGGAAGAGGAGTACTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

99.621

100

0.996

Multiple sequence alignment