Detailed information NTG0115669

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: RG32_RS06025
• Genome accession: NZ_CP010132
• Coordinates: 1134632..1135657 (-)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain C10
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 1129632..1140657

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RG32_RS05995 (RG32_05690)	zapB	1129716..1129961 (+)	246	WP_001296623.1	septal ring assembly protein ZapB	-
RG32_RS06000 (RG32_05695)	rraA	1130046..1130531 (-)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
RG32_RS06005 (RG32_05700)	menA	1130624..1131550 (-)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
RG32_RS06010 (RG32_05705)	hslU	1131617..1132948 (-)	1332	WP_001293343.1	HslU--HslV peptidase ATPase subunit	-
RG32_RS06015 (RG32_05710)	hslV	1132958..1133488 (-)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
RG32_RS06020 (RG32_05715)	ftsN	1133581..1134540 (-)	960	WP_000068828.1	cell division protein FtsN	-
RG32_RS06025 (RG32_05720)	cytR	1134632..1135657 (-)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
RG32_RS06030 (RG32_05725)	priA	1135813..1138011 (-)	2199	WP_040090268.1	primosomal protein N'	Machinery gene
RG32_RS06035 (RG32_05730)	rpmE	1138214..1138426 (+)	213	WP_000710769.1	50S ribosomal protein L31	-
RG32_RS06040 (RG32_05735)	yiiX	1138487..1139095 (-)	609	WP_000797344.1	YiiX family permuted papain-like enzyme	-
RG32_RS06045 (RG32_05740)	metJ	1139279..1139596 (-)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=115669 RG32_RS06025 WP_000644904.1 1134632..1135657(-) (cytR) [Escherichia coli strain C10]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=115669 RG32_RS06025 WP_000644904.1 1134632..1135657(-) (cytR) [Escherichia coli strain C10]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCAGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATTGATTTGATCATCACCAAACAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCAATGCAACAGCTGCTT
GATCTTCCACAACCGCCTACTGCAGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628