Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   KJP77_RS07870 Genome accession   NZ_OX419554
Coordinates   1484529..1484993 (-) Length   154 a.a.
NCBI ID   WP_003232406.1    Uniprot ID   G4NVM0
Organism   Bacillus subtilis isolate NRS6160     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1479529..1489993
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KJP77_RS07850 (NRS6160_07735) kinA 1479996..1481816 (+) 1821 WP_015715804.1 sporulation histidine kinase KinA -
  KJP77_RS07855 (NRS6160_07740) dapX 1481826..1483007 (-) 1182 WP_014479654.1 aminotransferase A -
  KJP77_RS07860 (NRS6160_07745) - 1483209..1483370 (-) 162 WP_003245246.1 hypothetical protein -
  KJP77_RS07865 (NRS6160_07750) cheV 1483574..1484485 (+) 912 WP_009967126.1 chemotaxis protein CheV -
  KJP77_RS07870 (NRS6160_07755) kre 1484529..1484993 (-) 465 WP_003232406.1 YkyB family protein Regulator
  KJP77_RS07875 (NRS6160_07760) ykuC 1485119..1486411 (-) 1293 WP_015252195.1 MFS transporter -
  KJP77_RS07880 (NRS6160_07765) ltdD 1486487..1486981 (-) 495 WP_072174092.1 L,D-transpeptidase family protein -
  KJP77_RS07885 (NRS6160_07770) ppeE 1487038..1487898 (-) 861 WP_003232400.1 metallophosphoesterase -
  KJP77_RS07890 (NRS6160_07775) fadH 1488041..1488805 (+) 765 WP_213416080.1 2,4-dienoyl-CoA reductase -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17895.71 Da        Isoelectric Point: 10.3545

>NTDB_id=1156589 KJP77_RS07870 WP_003232406.1 1484529..1484993(-) (kre) [Bacillus subtilis isolate NRS6160]
MDDHAYTKDLQPTVENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSKNPRFSQQQSDVLISIGD
YYFHMPPTKEDFEHLPHLGTLNQSYRNPKAQMSLTKAKHLLQEYVGMKEKPLVPNRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=1156589 KJP77_RS07870 WP_003232406.1 1484529..1484993(-) (kre) [Bacillus subtilis isolate NRS6160]
ATGGACGACCATGCATATACGAAAGATCTGCAGCCAACCGTAGAAAATCTTTCAAAAGCAGTTTACACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTATATCTGCTGAAAAAACGGGCTTTGCAAAAGCTTGTCAAAGAAGGTAAAG
GAAAGAAAATAGGGCTTCATTTTTCAAAAAATCCAAGGTTCAGCCAACAGCAATCGGACGTGCTTATCTCAATCGGAGAC
TACTATTTTCACATGCCTCCAACTAAAGAAGACTTCGAACATCTTCCGCATTTAGGTACACTTAATCAATCGTACCGAAA
TCCTAAAGCTCAAATGTCTTTAACAAAAGCGAAACACCTATTGCAAGAATATGTCGGCATGAAAGAAAAGCCGCTAGTGC
CAAATCGCCAGCAGCCAGCTTACCATAAACCGGTCTTTAAAAAACTTGGCGAGAGTTACTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(14-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NVM0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment