Detailed information NTG1156580

Bioinformatically predicted

Overview

• Name: med
• Type: Regulator
• Locus tag: KJP77_RS06365
• Genome accession: NZ_OX419554
• Coordinates: 1214884..1215837 (+)
• Length: 317 a.a.
• NCBI ID: WP_014476425.1
• Uniprot ID: A0A0K6M9I2
• Organism: Bacillus subtilis isolate NRS6160
• Function: regulation of regulators (predicted from homology) Competence regulation

Genomic Context

Location: 1209884..1220837

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KJP77_RS06340 (NRS6160_06275)	argF	1211716..1212675 (+)	960	WP_003232980.1	ornithine carbamoyltransferase	-
KJP77_RS06345 (NRS6160_06280)	yjzC	1212761..1212940 (+)	180	WP_003245356.1	YjzC family protein	-
KJP77_RS06350 (NRS6160_06285)	yjzD	1212986..1213171 (-)	186	WP_029317607.1	DUF2929 domain-containing protein	-
KJP77_RS06355 (NRS6160_06290)	-	1213421..1214155 (+)	735	WP_003245223.1	hypothetical protein	-
KJP77_RS06360 (NRS6160_06295)	-	1214237..1214794 (+)	558	WP_014479435.1	hypothetical protein	-
KJP77_RS06365 (NRS6160_06300)	med	1214884..1215837 (+)	954	WP_014476425.1	transcriptional regulator Med	Regulator
KJP77_RS06370 (NRS6160_06305)	comZ	1215852..1216043 (+)	192	WP_003224559.1	ComG operon transcriptional repressor ComZ	Regulator
KJP77_RS06375 (NRS6160_06310)	yjzB	1216073..1216312 (-)	240	WP_003232972.1	spore coat protein YjzB	-
KJP77_RS06380 (NRS6160_06315)	fabH	1216477..1217415 (+)	939	WP_003232971.1	beta-ketoacyl-ACP synthase III	-
KJP77_RS06385 (NRS6160_06320)	fabF	1217438..1218679 (+)	1242	WP_003244890.1	beta-ketoacyl-ACP synthase II	-
KJP77_RS06390 (NRS6160_06325)	yjaZ	1218755..1219540 (+)	786	WP_003232967.1	DUF2268 domain-containing protein	-
KJP77_RS06395 (NRS6160_06330)	appD	1219732..1220718 (+)	987	WP_003232965.1	oligopeptide ABC transporter ATP-binding protein AppD	-

Sequence

Protein

• Length: 317 a.a.
• Molecular weight: 35310.84 Da
• Isoelectric Point: 4.6031

>NTDB_id=1156580 KJP77_RS06365 WP_014476425.1 1214884..1215837(+) (med) [Bacillus subtilis isolate NRS6160]
MITRLVMIFSVLLLLSGCGQTPFKGKIEKVGMLFPDTINDLVWGTKGYKGLLNIQSKYNVDVYYKEGVKTEEDIINAIED
FHKRGVNLLYGHGSEYAEVFNLVGEDYPDMEFVISNAKAKADNVTSVHFSGEAMGFFGGMTAAHMSKTNQVGVIASFTWQ
PEVDGFIKGAKYENPDIEVNTKYTDHWDDDTTAVKLYQKMKNEGADVVYPAGDGYNVPVIQQIKKDGLYAIGYVTDQSDL
GENTVLTSTVQNVDKAYEIIAEQFNKGTLEGGDHYYDLNTGVVEMGTFSPLVDKDFQQRIAKLIKTYNKTGELPKNE

Nucleotide

• Length: 954 bp

>NTDB_id=1156580 KJP77_RS06365 WP_014476425.1 1214884..1215837(+) (med) [Bacillus subtilis isolate NRS6160]
TTGATCACAAGGCTTGTCATGATCTTTTCTGTCCTCCTTTTATTGAGTGGATGTGGACAAACTCCGTTCAAAGGAAAAAT
TGAGAAGGTCGGCATGCTCTTTCCTGATACGATTAATGACCTCGTATGGGGTACAAAAGGGTATAAAGGATTACTGAATA
TACAATCCAAATACAATGTGGACGTCTATTATAAAGAAGGCGTTAAAACAGAAGAAGATATCATAAATGCGATTGAGGAT
TTTCATAAGAGGGGCGTCAATCTGCTCTACGGCCATGGGAGTGAATATGCTGAGGTGTTTAACTTGGTCGGCGAAGATTA
TCCAGATATGGAATTCGTCATTTCCAATGCGAAAGCGAAAGCTGATAATGTAACAAGTGTCCATTTTAGCGGGGAAGCAA
TGGGCTTTTTTGGAGGAATGACTGCTGCCCATATGTCGAAAACGAATCAGGTCGGTGTAATTGCTTCCTTTACGTGGCAG
CCTGAGGTTGACGGTTTTATCAAAGGGGCCAAGTATGAAAATCCGGATATAGAGGTAAATACGAAATATACGGATCATTG
GGATGATGATACAACAGCAGTAAAGCTTTATCAGAAAATGAAGAACGAAGGCGCGGATGTTGTGTATCCCGCCGGAGACG
GGTATAATGTTCCTGTTATTCAGCAAATCAAAAAAGACGGTCTTTATGCCATAGGCTACGTCACAGATCAATCGGATCTG
GGCGAGAATACCGTATTAACCAGCACGGTGCAAAATGTGGACAAGGCCTATGAAATCATTGCTGAACAATTTAATAAAGG
CACCCTTGAGGGCGGCGATCATTACTACGACCTGAACACGGGAGTCGTTGAGATGGGAACATTCAGCCCGCTCGTCGACA
AAGACTTTCAGCAAAGAATCGCCAAGCTGATCAAAACATACAACAAAACAGGCGAGCTGCCAAAAAACGAGTAA

Domains

Predicted by InterproScan.

• ABC transporter substrate-binding protein PnrA-like (Bmp) (27-317)

3D structure

• AlphaFold DB: A0A0K6M9I2

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
med	Bacillus subtilis subsp. subtilis str. 168	99.685	100	0.997