Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   KJP77_RS04845 Genome accession   NZ_OX419554
Coordinates   933905..934699 (+) Length   264 a.a.
NCBI ID   WP_003243354.1    Uniprot ID   A0AAE2SGN5
Organism   Bacillus subtilis isolate NRS6160     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 928905..939699
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KJP77_RS04815 (NRS6160_04775) sxzA 929743..930774 (+) 1032 WP_015715532.1 iron ABC transporter permease -
  KJP77_RS04820 (NRS6160_04780) yfhB 930890..931771 (+) 882 WP_015715533.1 PhzF family phenazine biosynthesis isomerase -
  KJP77_RS04825 (NRS6160_04785) yfhC 931859..932443 (+) 585 WP_003243940.1 nitroreductase -
  KJP77_RS04830 (NRS6160_04790) yfhD 932482..932673 (-) 192 WP_003233561.1 YfhD family protein -
  KJP77_RS04835 (NRS6160_04795) yfhE 932740..932850 (-) 111 WP_003223230.1 YfhE family protein -
  KJP77_RS04840 (NRS6160_04800) yfhF 932905..933816 (-) 912 WP_015715534.1 TIGR01777 family oxidoreductase -
  KJP77_RS04845 (NRS6160_04805) recX 933905..934699 (+) 795 WP_003243354.1 recombination regulator RecX Regulator
  KJP77_RS04850 (NRS6160_04810) yfhH 934701..935015 (+) 315 WP_003244592.1 YfhH family protein -
  KJP77_RS04855 (NRS6160_04815) yfhI 935136..936329 (+) 1194 WP_015715535.1 MFS transporter -
  KJP77_RS04860 (NRS6160_04820) sspK 936361..936513 (-) 153 WP_015715536.1 small, acid-soluble spore protein K -
  KJP77_RS04865 (NRS6160_04825) yfhJ 936638..936907 (+) 270 WP_003243789.1 YfhJ family protein -
  KJP77_RS04870 (NRS6160_04830) yfhK 937052..937570 (+) 519 WP_015715537.1 SH3 domain-containing protein -
  KJP77_RS04875 (NRS6160_04835) spdL 937655..937987 (+) 333 WP_003242803.1 SdpC immunity protein SpdL -
  KJP77_RS04880 (NRS6160_04840) ephM 937974..938834 (+) 861 WP_015715538.1 epoxide hydrolase EphM -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 31013.23 Da        Isoelectric Point: 6.6686

>NTDB_id=1156572 KJP77_RS04845 WP_003243354.1 933905..934699(+) (recX) [Bacillus subtilis isolate NRS6160]
MPFITKISTQKKNTERFNIFLDDKYAFSVDADVLVKFELKKGKELDDLDIIEIQYGDEVKKGFNRALDFLSYRMRSTKEV
EDHLKKKETSPPVIAEVIHRLNDYKYLNDQEFAAAYVSTHKKTNGKGPDVLFRELRAKGIDDDTIKEALSSFSFEDQTRE
AVKHVEKLLKKDKKLSTKELKQRAQLQLQRKGFSFDVISAAMDQIEYENDEDTEKEALRLHAEKAFRKYRYDGSYESAMK
VKQFLFRKGFSLDLIEQLLQEEEY

Nucleotide


Download         Length: 795 bp        

>NTDB_id=1156572 KJP77_RS04845 WP_003243354.1 933905..934699(+) (recX) [Bacillus subtilis isolate NRS6160]
ATGCCGTTTATTACAAAAATATCAACGCAAAAAAAGAATACGGAACGCTTCAATATTTTTCTGGATGATAAATACGCCTT
CAGCGTGGACGCGGATGTGCTCGTGAAATTTGAGCTCAAGAAGGGAAAAGAACTCGATGATCTTGACATCATTGAGATTC
AATACGGCGATGAAGTGAAGAAAGGCTTCAACCGTGCGCTTGACTTTTTATCCTATCGAATGCGGTCGACGAAAGAGGTC
GAGGACCACTTAAAGAAAAAAGAAACCTCGCCCCCCGTCATTGCGGAAGTCATCCATAGGCTTAACGATTACAAGTACTT
AAACGACCAGGAATTTGCCGCAGCCTATGTCAGCACTCACAAAAAAACAAACGGAAAAGGCCCTGATGTTTTGTTCAGAG
AGCTAAGAGCGAAGGGAATTGATGACGATACAATTAAGGAGGCGCTAAGTTCCTTTTCCTTTGAGGATCAGACAAGAGAA
GCGGTCAAGCATGTTGAAAAGCTTCTCAAAAAAGATAAAAAGCTTTCGACGAAAGAACTCAAACAGCGCGCCCAGCTGCA
GCTTCAGCGCAAGGGCTTCTCATTTGATGTTATCAGCGCGGCGATGGATCAGATTGAATATGAAAATGATGAAGACACAG
AGAAAGAAGCGCTGCGCCTTCACGCGGAAAAAGCGTTTAGAAAATACCGCTATGACGGCTCATATGAAAGCGCCATGAAG
GTCAAACAATTTTTATTTCGCAAAGGATTCTCACTCGATTTAATCGAGCAATTATTGCAGGAAGAGGAGTACTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment