Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   KJP78_RS07690 Genome accession   NZ_OX419553
Coordinates   1464953..1465528 (+) Length   191 a.a.
NCBI ID   WP_003232378.1    Uniprot ID   -
Organism   Bacillus subtilis isolate NRS6183     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1459953..1470528
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KJP78_RS07660 (NRS6183_07600) dapD 1460139..1460849 (+) 711 WP_003218680.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  KJP78_RS07665 (NRS6183_07605) dapI 1460919..1462043 (+) 1125 WP_021479383.1 N-acetyldiaminopimelate deacetylase -
  KJP78_RS07670 (NRS6183_07610) ykuS 1462105..1462350 (+) 246 WP_003232382.1 YkuS family protein -
  KJP78_RS07675 (NRS6183_07615) mscT 1462387..1463190 (-) 804 WP_003244994.1 small-conductance mechanosensitive channel protein MscT -
  KJP78_RS07680 (NRS6183_07620) ahpA 1463427..1463969 (+) 543 WP_003245371.1 biofilm-specific peroxidase AhpA -
  KJP78_RS07685 (NRS6183_07625) ykuV 1464041..1464487 (+) 447 WP_015252187.1 thiol-disulfide oxidoreductase YkuV -
  KJP78_RS07690 (NRS6183_07630) rok 1464953..1465528 (+) 576 WP_003232378.1 transcriptional regulator Rok Regulator
  KJP78_RS07695 (NRS6183_07635) cse15 1465569..1466534 (-) 966 WP_029727015.1 spore protein Cse15 -
  KJP78_RS07700 (NRS6183_07640) mobA 1466671..1467270 (+) 600 WP_021479380.1 molybdenum cofactor guanylyltransferase -
  KJP78_RS07705 (NRS6183_07645) moeB 1467321..1468340 (+) 1020 WP_017696813.1 molybdopterin-synthase adenylyltransferase MoeB -
  KJP78_RS07710 (NRS6183_07650) glp 1468358..1469650 (+) 1293 WP_038427631.1 gephyrin-like molybdotransferase Glp -
  KJP78_RS07715 (NRS6183_07655) mobB 1469611..1470132 (+) 522 WP_029725925.1 molybdopterin-guanine dinucleotide biosynthesis protein B -

Sequence

Protein


Download         Length: 191 a.a.        Molecular weight: 21839.85 Da        Isoelectric Point: 9.8633

>NTDB_id=1156509 KJP78_RS07690 WP_003232378.1 1464953..1465528(+) (rok) [Bacillus subtilis isolate NRS6183]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDRNGSPSEIKKDFRSEKKPDSLPVLAELAAQEIRSYQPQS
QQQSVQPQLQSISSLPAGIPDGTTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFMQ
SLIKMYPEVKKPYRGQYILEGEIESAESANE

Nucleotide


Download         Length: 576 bp        

>NTDB_id=1156509 KJP78_RS07690 WP_003232378.1 1464953..1465528(+) (rok) [Bacillus subtilis isolate NRS6183]
ATGTTTAATGAAAGAGAAGCTTTGCGCTTGCGGTTAGAACAATTAAATGAAGCTGAAGTGAAAGTCATTCGTGAATATCA
AATTGAACGTGATAAAATATACGCAAAATTAAGAGAGCTGGACAGAAATGGAAGCCCTTCCGAAATCAAAAAGGATTTCC
GTTCTGAAAAAAAACCTGACTCTCTGCCGGTTCTCGCTGAGCTTGCGGCTCAGGAAATCAGAAGCTATCAGCCGCAATCA
CAGCAGCAGTCTGTCCAGCCTCAGCTTCAATCTATTTCCTCTCTTCCTGCCGGTATACCAGACGGAACAACACGAAGAAG
AAGAGGAACGGCAAGACCGGGATCAAAAGCAGCTAAGCTGCGTGAAGCTGCTATTAAAACATTAAAACGCCACAACGCGG
CGATTAAGAGCTCGGAGCTTCAAAAAGAGATTGAAAAAGAAAGCGGTCTTGAAATCCCTAATATGACAACGTTTATGCAA
AGCTTAATTAAAATGTACCCGGAAGTGAAAAAGCCATATCGCGGGCAGTACATTTTAGAGGGTGAAATCGAATCTGCAGA
ATCAGCAAATGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment