Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   KJP78_RS04565 Genome accession   NZ_OX419553
Coordinates   896779..897573 (+) Length   264 a.a.
NCBI ID   WP_003243354.1    Uniprot ID   A0AAE2SGN5
Organism   Bacillus subtilis isolate NRS6183     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 891779..902573
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KJP78_RS04535 (NRS6183_04515) sxzA 892637..893668 (+) 1032 WP_015715532.1 iron ABC transporter permease -
  KJP78_RS04540 (NRS6183_04520) yfhB 893784..894645 (+) 862 Protein_843 PhzF family phenazine biosynthesis isomerase -
  KJP78_RS04545 (NRS6183_04530) yfhC 894733..895317 (+) 585 WP_003243940.1 nitroreductase -
  KJP78_RS04550 (NRS6183_04535) yfhD 895356..895547 (-) 192 WP_003233561.1 YfhD family protein -
  KJP78_RS04555 (NRS6183_04540) yfhE 895614..895724 (-) 111 WP_003223230.1 YfhE family protein -
  KJP78_RS04560 (NRS6183_04545) yfhF 895779..896690 (-) 912 WP_198878901.1 TIGR01777 family oxidoreductase -
  KJP78_RS04565 (NRS6183_04550) recX 896779..897573 (+) 795 WP_003243354.1 recombination regulator RecX Regulator
  KJP78_RS04570 (NRS6183_04555) yfhH 897575..897889 (+) 315 WP_038428648.1 YfhH family protein -
  KJP78_RS04575 (NRS6183_04560) yfhI 898033..899226 (+) 1194 WP_003243500.1 MFS transporter -
  KJP78_RS04580 (NRS6183_04565) sspK 899258..899410 (-) 153 WP_003223241.1 small, acid-soluble spore protein K -
  KJP78_RS04585 (NRS6183_04570) yfhJ 899535..899804 (+) 270 WP_003243789.1 YfhJ family protein -
  KJP78_RS04590 (NRS6183_04575) yfhK 899949..900467 (+) 519 WP_029317456.1 SH3 domain-containing protein -
  KJP78_RS04595 (NRS6183_04580) spdL 900552..900869 (+) 318 WP_038428649.1 SdpC immunity protein SpdL -
  KJP78_RS04600 (NRS6183_04585) ephM 900871..901731 (+) 861 WP_014479220.1 epoxide hydrolase EphM -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 31013.23 Da        Isoelectric Point: 6.6686

>NTDB_id=1156491 KJP78_RS04565 WP_003243354.1 896779..897573(+) (recX) [Bacillus subtilis isolate NRS6183]
MPFITKISTQKKNTERFNIFLDDKYAFSVDADVLVKFELKKGKELDDLDIIEIQYGDEVKKGFNRALDFLSYRMRSTKEV
EDHLKKKETSPPVIAEVIHRLNDYKYLNDQEFAAAYVSTHKKTNGKGPDVLFRELRAKGIDDDTIKEALSSFSFEDQTRE
AVKHVEKLLKKDKKLSTKELKQRAQLQLQRKGFSFDVISAAMDQIEYENDEDTEKEALRLHAEKAFRKYRYDGSYESAMK
VKQFLFRKGFSLDLIEQLLQEEEY

Nucleotide


Download         Length: 795 bp        

>NTDB_id=1156491 KJP78_RS04565 WP_003243354.1 896779..897573(+) (recX) [Bacillus subtilis isolate NRS6183]
ATGCCGTTTATTACAAAAATATCAACGCAAAAAAAGAATACGGAACGCTTCAATATTTTTCTGGATGATAAATACGCCTT
CAGCGTGGACGCGGATGTGCTCGTGAAATTTGAGCTCAAGAAGGGAAAAGAACTCGATGATCTTGACATCATTGAGATTC
AATACGGCGATGAAGTGAAGAAAGGCTTCAACCGTGCGCTTGACTTTTTATCCTATCGAATGCGGTCGACGAAAGAGGTC
GAGGACCACTTAAAGAAAAAAGAAACCTCGCCCCCCGTCATTGCGGAAGTCATCCATAGGCTTAACGATTACAAGTACTT
AAACGACCAGGAATTTGCCGCAGCCTATGTCAGCACTCACAAAAAAACAAACGGAAAAGGCCCTGATGTTTTGTTCAGAG
AGCTAAGAGCGAAGGGAATTGATGACGATACAATTAAGGAGGCGCTAAGTTCCTTTTCCTTTGAGGATCAGACAAGGGAA
GCGGTCAAGCATGTTGAAAAGCTTCTCAAAAAAGATAAAAAACTTTCGACGAAAGAACTTAAACAGCGCGCCCAGCTGCA
GCTTCAGCGCAAGGGCTTCTCATTTGATGTTATCAGCGCGGCGATGGATCAGATTGAATATGAAAATGATGAAGACACAG
AGAAAGAAGCGCTGCGCCTTCACGCGGAAAAAGCGTTTAGAAAATACCGCTATGACGGCTCATATGAAAGCGCCATGAAG
GTCAAACAATTTTTATTCCGCAAAGGATTCTCACTCGATTTAATCGAGCAATTACTGCAGGAAGAGGAGTACTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment