Detailed information    

insolico Bioinformatically predicted

Overview


Name   degS   Type   Regulator
Locus tag   KJP69_RS18290 Genome accession   NZ_OX419550
Coordinates   3523313..3524470 (-) Length   385 a.a.
NCBI ID   WP_003227983.1    Uniprot ID   A0A199WDV9
Organism   Bacillus subtilis isolate NRS6187     
Function   phosphorylation of DegU (predicted from homology)   
Competence regulation

Genomic Context


Location: 3518313..3529470
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KJP69_RS18260 (NRS6187_18095) yvyF 3518566..3518985 (-) 420 WP_003227995.1 TIGR03826 family flagellar region protein -
  KJP69_RS18265 (NRS6187_18100) comFC 3519059..3519781 (-) 723 WP_029725992.1 comF operon protein ComFC Machinery gene
  KJP69_RS18270 (NRS6187_18105) comFB 3519745..3520041 (-) 297 WP_015483764.1 late competence protein ComFB -
  KJP69_RS18275 (NRS6187_18110) comFA 3520101..3521492 (-) 1392 WP_029725993.1 ATP-dependent helicase ComFA Machinery gene
  KJP69_RS18280 (NRS6187_18115) fakBA 3521598..3522443 (-) 846 WP_003227986.1 DegV family protein -
  KJP69_RS18285 (NRS6187_18120) degU 3522541..3523230 (-) 690 WP_003219701.1 two-component system response regulator DegU Regulator
  KJP69_RS18290 (NRS6187_18125) degS 3523313..3524470 (-) 1158 WP_003227983.1 two-component sensor histidine kinase DegS Regulator
  KJP69_RS18295 (NRS6187_18130) yvyE 3524687..3525340 (+) 654 WP_003227979.1 YigZ family protein -
  KJP69_RS18300 (NRS6187_18135) tagV 3525340..3526515 (+) 1176 WP_003227977.1 polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase TagV -
  KJP69_RS18305 (NRS6187_18140) tagO 3526588..3527664 (-) 1077 WP_003227975.1 MraY family glycosyltransferase -
  KJP69_RS18310 (NRS6187_18145) tuaH 3527809..3529002 (-) 1194 WP_072692828.1 glycosyltransferase family 1 protein -

Sequence


Protein


Download         Length: 385 a.a.        Molecular weight: 44957.76 Da        Isoelectric Point: 6.2957

>NTDB_id=1156383 KJP69_RS18290 WP_003227983.1 3523313..3524470(-) (degS) [Bacillus subtilis isolate NRS6187]
MNKTKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVQTRHARNRLSEVSR
NFHRFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLREVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGAEDGFQEIKNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGETEDQRLAPQFEVALFRLAQEAVSNALKHSESEEITVKVEI
TKDFVILMIKDNGKGFDLKEAKEKKNKSFGLLGMKERVDLLEGTMTIDSKIGLGTFIMIKVPLSL

Nucleotide


Download         Length: 1158 bp        

>NTDB_id=1156383 KJP69_RS18290 WP_003227983.1 3523313..3524470(-) (degS) [Bacillus subtilis isolate NRS6187]
ATGAATAAAACAAAGATGGATTCCAAAGTGCTGGATTCTATTTTGATGAAGATGCTGAAAACCGTTGACGGGAGCAAGGA
CGAGGTTTTTCAAATCGGGGAGCAGTCACGCCAGCAGTATGAACAGCTGGTCGAAGAACTGAAACAAATTAAACAGCAGG
TGTATGAAGTGATCGAGCTTGGCGATAAACTTGAAGTGCAAACTCGCCATGCGAGAAACCGTTTATCCGAGGTCAGCCGT
AATTTTCATAGATTCAGTGAAGAGGAAATCCGCAATGCTTATGAAAAAGCCCATAAGCTGCAGGTAGAATTGACGATGAT
CCAGCAGCGTGAGAAGCAATTGCGCGAACGGCGGGACGATTTGGAGCGCAGATTGCTAGGGCTTCAGGAAATCATTGAGC
GGTCAGAATCATTAGTAAGCCAAATTACAGTTGTGCTCAACTACTTGAATCAGGATTTGCGCGAAGTTGGACTGCTTCTT
GCTGATGCTCAGGCAAAACAGGATTTCGGCTTAAGAATTATTGAGGCGCAGGAAGAAGAGCGAAAAAGAGTCTCAAGAGA
AATCCATGACGGACCCGCTCAAATGCTGGCGAATGTTATGATGAGATCGGAATTAATCGAGCGGATTTTCCGTGACCGGG
GCGCAGAGGACGGATTCCAAGAAATTAAAAATCTACGCCAAAATGTTCGGAATGCCCTTTACGAAGTGAGAAGGATTATA
TATGATTTAAGACCGATGGCCCTTGATGACCTAGGCCTGATTCCAACTTTAAGAAAATATCTATATACAACCGAGGAATA
TAACGGGAAGGTCAAAATACATTTTCAGTGCATTGGAGAAACAGAGGATCAGAGGCTAGCGCCTCAGTTTGAGGTTGCGC
TCTTCAGGCTCGCACAGGAAGCTGTGTCTAATGCGCTAAAGCATTCTGAATCTGAAGAAATTACAGTCAAAGTTGAGATC
ACAAAGGATTTTGTGATTTTAATGATAAAAGATAACGGTAAAGGGTTCGACCTGAAGGAAGCGAAAGAGAAGAAAAACAA
ATCATTCGGCTTGCTGGGCATGAAAGAAAGAGTAGATTTATTGGAAGGAACGATGACAATAGATTCGAAAATAGGTCTTG
GGACATTTATTATGATTAAGGTTCCGTTATCTCTTTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A199WDV9

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  degS Bacillus subtilis subsp. subtilis str. 168

100

100

1


Multiple sequence alignment