Detailed information
Bioinformatically predicted
Overview
| Name | sinR | Type | Regulator |
| Locus tag | KJP69_RS12405 | Genome accession | NZ_OX419550 |
| Coordinates | 2415961..2416296 (+) | Length | 111 a.a. |
| NCBI ID | WP_003226345.1 | Uniprot ID | A0AAE2VGU9 |
| Organism | Bacillus subtilis isolate NRS6187 | ||
| Function | repression of rok; repression of degU; repression of spo0A (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2410961..2421296
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KJP69_RS12385 (NRS6187_12295) | gcvT | 2411554..2412642 (-) | 1089 | WP_015714248.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| KJP69_RS12390 (NRS6187_12300) | yqhH | 2413083..2414756 (+) | 1674 | WP_029726726.1 | SNF2-related protein | - |
| KJP69_RS12395 (NRS6187_12305) | yqhG | 2414777..2415571 (+) | 795 | WP_015714249.1 | YqhG family protein | - |
| KJP69_RS12400 (NRS6187_12310) | sinI | 2415754..2415927 (+) | 174 | WP_003230187.1 | anti-repressor SinI family protein | Regulator |
| KJP69_RS12405 (NRS6187_12315) | sinR | 2415961..2416296 (+) | 336 | WP_003226345.1 | transcriptional regulator SinR | Regulator |
| KJP69_RS12410 (NRS6187_12320) | tasA | 2416389..2417174 (-) | 786 | WP_014664586.1 | biofilm matrix protein TasA | - |
| KJP69_RS12415 (NRS6187_12325) | sipW | 2417238..2417810 (-) | 573 | WP_072692741.1 | signal peptidase I | - |
| KJP69_RS12420 (NRS6187_12330) | tapA | 2417794..2418555 (-) | 762 | WP_029726724.1 | amyloid fiber anchoring/assembly protein TapA | - |
| KJP69_RS12425 (NRS6187_12335) | yqzG | 2418827..2419153 (+) | 327 | WP_003246051.1 | YqzG/YhdC family protein | - |
| KJP69_RS12430 (NRS6187_12340) | spoIIT | 2419195..2419374 (-) | 180 | WP_029726723.1 | YqzE family protein | - |
| KJP69_RS12435 (NRS6187_12345) | comGG | 2419446..2419820 (-) | 375 | WP_029726722.1 | ComG operon protein ComGG | Machinery gene |
| KJP69_RS12440 | comGF | 2419821..2420204 (-) | 384 | WP_029726721.1 | ComG operon protein ComGF | Machinery gene |
| KJP69_RS12445 (NRS6187_12355) | comGE | 2420230..2420577 (-) | 348 | WP_014480255.1 | ComG operon protein 5 | Machinery gene |
| KJP69_RS12450 (NRS6187_12360) | comGD | 2420561..2420992 (-) | 432 | WP_029726720.1 | comG operon protein ComGD | Machinery gene |
| KJP69_RS12455 (NRS6187_12365) | comGC | 2420982..2421278 (-) | 297 | WP_029726719.1 | comG operon protein ComGC | Machinery gene |
Sequence
Protein
Download Length: 111 a.a. Molecular weight: 12988.64 Da Isoelectric Point: 7.2023
>NTDB_id=1156354 KJP69_RS12405 WP_003226345.1 2415961..2416296(+) (sinR) [Bacillus subtilis isolate NRS6187]
MIGQRIKQYRKEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLLDEKHETEYDGQLDSEWEK
LVRDAMTSGVSKKQFREFLDYQKWRKSQKEE
MIGQRIKQYRKEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLLDEKHETEYDGQLDSEWEK
LVRDAMTSGVSKKQFREFLDYQKWRKSQKEE
Nucleotide
Download Length: 336 bp
>NTDB_id=1156354 KJP69_RS12405 WP_003226345.1 2415961..2416296(+) (sinR) [Bacillus subtilis isolate NRS6187]
TTGATTGGCCAGCGTATTAAACAATACCGTAAAGAAAAAGGCTACTCACTATCAGAACTAGCTGAAAAAGCTGGGGTAGC
GAAGTCTTATTTAAGCTCAATAGAACGAAATCTACAAACGAACCCCTCCATTCAATTTCTCGAAAAAGTCTCCGCTGTTC
TGGACGTCTCGGTTCATACTTTGCTCGATGAGAAACATGAAACCGAATACGATGGTCAATTAGATAGTGAATGGGAGAAA
TTGGTTCGCGATGCGATGACATCCGGGGTATCGAAAAAACAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATC
ACAAAAAGAGGAGTAG
TTGATTGGCCAGCGTATTAAACAATACCGTAAAGAAAAAGGCTACTCACTATCAGAACTAGCTGAAAAAGCTGGGGTAGC
GAAGTCTTATTTAAGCTCAATAGAACGAAATCTACAAACGAACCCCTCCATTCAATTTCTCGAAAAAGTCTCCGCTGTTC
TGGACGTCTCGGTTCATACTTTGCTCGATGAGAAACATGAAACCGAATACGATGGTCAATTAGATAGTGAATGGGAGAAA
TTGGTTCGCGATGCGATGACATCCGGGGTATCGAAAAAACAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATC
ACAAAAAGAGGAGTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| sinR | Bacillus subtilis subsp. subtilis str. 168 |
100 |
100 |
1 |