Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   QNH80_RS09500 Genome accession   NZ_OX352996
Coordinates   1948755..1949489 (+) Length   244 a.a.
NCBI ID   WP_002939204.1    Uniprot ID   A0A0K2E869
Organism   Streptococcus suis isolate 861160_dhsdS     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1943755..1954489
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QNH80_RS09470 - 1943951..1945615 (+) 1665 WP_074400592.1 DAK2 domain-containing protein -
  QNH80_RS09475 tsaE 1945716..1946156 (+) 441 WP_024376437.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  QNH80_RS09480 - 1946149..1946676 (+) 528 WP_002939196.1 GNAT family N-acetyltransferase -
  QNH80_RS09485 - 1946673..1947866 (+) 1194 WP_044666811.1 LCP family protein -
  QNH80_RS09490 - 1947975..1948277 (-) 303 WP_002939199.1 hypothetical protein -
  QNH80_RS09495 - 1948279..1948692 (-) 414 WP_002939203.1 HIT family protein -
  QNH80_RS09500 pptA 1948755..1949489 (+) 735 WP_002939204.1 ABC transporter ATP-binding protein Regulator
  QNH80_RS09505 - 1949486..1950526 (+) 1041 WP_013730555.1 ABC transporter permease -
  QNH80_RS09510 - 1950576..1951370 (+) 795 WP_013730554.1 phosphotransferase family protein -
  QNH80_RS09515 trmB 1951367..1952005 (+) 639 WP_002939002.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  QNH80_RS09520 rimP 1952263..1952733 (+) 471 WP_002942369.1 ribosome maturation factor RimP -
  QNH80_RS09525 nusA 1952806..1953948 (+) 1143 WP_013730553.1 transcription termination factor NusA -
  QNH80_RS09530 - 1953965..1954261 (+) 297 WP_002942375.1 YlxR family protein -

Sequence

Protein


Download         Length: 244 a.a.        Molecular weight: 26760.04 Da        Isoelectric Point: 4.3999

>NTDB_id=1155650 QNH80_RS09500 WP_002939204.1 1948755..1949489(+) (pptA) [Streptococcus suis isolate 861160_dhsdS]
MLEVKNVTGGYVNIPVLKDVSFTVEDGQLVGLIGLNGAGKSTTIKEIIGLLTPYQGQIAIDGLTLLQGAENYRKKIGFIP
ETPSLYEELTLKEHLEVVAMAYDLSWEQAWGRVEHLLKLFRLDEKLDWFPVNFSKGMKQKVMIICAFMVEPSLLIVDEPF
LGLDPVAISDLIALLGEEKSKGTSILMSTHVLDSAEKMCDSFVILHQGQVRATGNLEELQSAFGMDGASLNEIYLALTQE
GVAG

Nucleotide


Download         Length: 735 bp        

>NTDB_id=1155650 QNH80_RS09500 WP_002939204.1 1948755..1949489(+) (pptA) [Streptococcus suis isolate 861160_dhsdS]
ATGTTAGAAGTAAAAAATGTAACTGGAGGATATGTCAATATCCCAGTTTTGAAAGATGTATCTTTTACCGTTGAGGATGG
TCAATTAGTTGGTCTAATTGGTTTAAATGGTGCAGGGAAATCAACGACTATTAAGGAAATTATCGGTCTTTTGACCCCCT
ATCAAGGACAGATTGCAATTGACGGCCTAACTTTGCTACAAGGGGCTGAAAATTATCGGAAGAAGATTGGGTTTATCCCT
GAAACACCAAGTTTGTATGAAGAACTAACCCTCAAAGAGCACTTGGAAGTGGTAGCAATGGCCTATGATTTATCCTGGGA
GCAAGCTTGGGGACGTGTTGAGCACTTGTTAAAACTGTTTCGCTTGGATGAGAAATTGGACTGGTTTCCTGTCAATTTTT
CAAAGGGAATGAAGCAGAAGGTCATGATTATTTGTGCTTTTATGGTGGAGCCGAGTCTATTGATTGTTGATGAGCCTTTT
CTGGGATTAGACCCTGTGGCTATCTCTGATTTAATCGCTCTTTTGGGGGAAGAAAAATCTAAGGGCACTTCAATCCTCAT
GTCCACTCACGTTCTTGACTCAGCTGAGAAAATGTGCGACTCTTTTGTGATTTTACATCAGGGACAGGTCCGTGCAACTG
GAAATTTGGAGGAGCTACAAAGCGCATTTGGTATGGATGGTGCAAGTCTGAATGAAATTTATCTGGCCTTGACGCAAGAA
GGAGTGGCTGGATGA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0K2E869

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

75.314

97.951

0.738
  pptA Streptococcus thermophilus LMD-9

73.64

97.951

0.721

Multiple sequence alignment