Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   QNH68_RS09855 Genome accession   NZ_OX352944
Coordinates   2055775..2056539 (+) Length   254 a.a.
NCBI ID   WP_014638879.1    Uniprot ID   G7SHV5
Organism   Streptococcus suis isolate 861160_LM_H     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 2050775..2061539
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QNH68_RS09840 - 2053157..2053840 (-) 684 WP_012775416.1 YoaK family protein -
  QNH68_RS09845 rlmH 2053865..2054344 (-) 480 WP_012028058.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  QNH68_RS09850 htrA 2054518..2055714 (+) 1197 WP_009911075.1 trypsin-like peptidase domain-containing protein Regulator
  QNH68_RS09855 spo0J 2055775..2056539 (+) 765 WP_014638879.1 ParB/RepB/Spo0J family partition protein Regulator
  QNH68_RS09860 dnaA 2056742..2058115 (+) 1374 WP_023368958.1 chromosomal replication initiator protein DnaA -
  QNH68_RS09865 dnaN 2058269..2059405 (+) 1137 WP_004194538.1 DNA polymerase III subunit beta -
  QNH68_RS09870 - 2059497..2060378 (+) 882 WP_011921629.1 diacylglycerol kinase family protein -
  QNH68_RS09875 - 2060388..2060591 (+) 204 WP_011922523.1 DUF951 family protein -
  QNH68_RS09880 - 2060695..2061054 (+) 360 WP_012774878.1 helix-turn-helix transcriptional regulator -

Sequence

Protein


Download         Length: 254 a.a.        Molecular weight: 28966.21 Da        Isoelectric Point: 9.1678

>NTDB_id=1155596 QNH68_RS09855 WP_014638879.1 2055775..2056539(+) (spo0J) [Streptococcus suis isolate 861160_LM_H]
MEELRTLNISEIHPNPYQPRIHFDEKELLELAQSIKENGLIQPIIVRKSSIIGYELLAGERRLRASQLAGLTTIPAVVKE
LTDDDLLYQAIIENLQRSNLNPIEEAASYQKLISRGLTHDEVAQIMGKSRPYISNLLRLLNLSSQTKQAVEEGQISQGHA
RQLVSFSEEKQAEWVQLILSKDLSVRTLEKLIAANKKKHTKLKQRDQFLKEQEDSLSKTLGTATKIIKKKNGSGEIRISF
NDLDEFERIINNFK

Nucleotide


Download         Length: 765 bp        

>NTDB_id=1155596 QNH68_RS09855 WP_014638879.1 2055775..2056539(+) (spo0J) [Streptococcus suis isolate 861160_LM_H]
ATGGAAGAATTACGTACACTAAATATTTCAGAAATCCATCCCAATCCCTATCAGCCAAGAATTCATTTTGATGAAAAGGA
GCTACTTGAGCTCGCTCAATCCATTAAGGAAAATGGATTAATTCAACCGATTATTGTAAGAAAATCTTCTATTATCGGAT
ACGAATTATTAGCTGGAGAAAGAAGGTTGCGAGCCAGTCAATTAGCTGGACTGACTACAATACCAGCAGTGGTAAAGGAA
CTAACTGATGATGATTTACTATATCAGGCTATCATAGAGAATCTACAGCGTTCTAACTTAAATCCGATAGAAGAAGCAGC
CTCTTATCAAAAATTGATTAGTAGAGGGTTAACGCATGATGAAGTTGCTCAAATCATGGGAAAATCAAGACCATATATCA
GTAATTTATTGCGCCTACTAAATCTATCATCTCAGACTAAACAAGCTGTAGAAGAAGGACAAATTTCACAAGGGCACGCG
CGACAATTGGTGTCATTTTCAGAAGAAAAGCAAGCCGAATGGGTTCAACTCATTTTATCAAAAGATTTAAGTGTGCGTAC
GCTTGAAAAATTAATAGCTGCAAATAAGAAAAAACACACTAAGCTTAAACAACGCGACCAATTTTTAAAAGAACAGGAAG
ATTCACTCAGTAAAACTCTTGGAACAGCTACAAAAATTATCAAGAAGAAAAACGGGAGCGGAGAAATTCGGATTAGCTTT
AATGACCTCGATGAATTCGAAAGAATTATCAACAATTTTAAATAG

Domains

Predicted by InterproScan.

HTH domain found in ParB protein (HTH_ParB)

(146-193)

ParB/Sulfiredoxin domain (ParB_N)

(7-94)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G7SHV5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

55.159

99.213

0.547

Multiple sequence alignment