Detailed information    

insolico Bioinformatically predicted

Overview


Name   spo0J   Type   Regulator
Locus tag   QNH65_RS07740 Genome accession   NZ_OX352940
Coordinates   1570330..1571094 (-) Length   254 a.a.
NCBI ID   WP_014638879.1    Uniprot ID   G7SHV5
Organism   Streptococcus suis isolate 861160_LM_A     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 1565330..1576094
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QNH65_RS07715 - 1565815..1566174 (-) 360 WP_012774878.1 helix-turn-helix transcriptional regulator -
  QNH65_RS07720 - 1566278..1566481 (-) 204 WP_011922523.1 DUF951 family protein -
  QNH65_RS07725 - 1566491..1567372 (-) 882 WP_011921629.1 diacylglycerol kinase family protein -
  QNH65_RS07730 dnaN 1567464..1568600 (-) 1137 WP_004194538.1 DNA polymerase III subunit beta -
  QNH65_RS07735 dnaA 1568754..1570127 (-) 1374 WP_023368958.1 chromosomal replication initiator protein DnaA -
  QNH65_RS07740 spo0J 1570330..1571094 (-) 765 WP_014638879.1 ParB/RepB/Spo0J family partition protein Regulator
  QNH65_RS07745 htrA 1571155..1572351 (-) 1197 WP_009911075.1 trypsin-like peptidase domain-containing protein Regulator
  QNH65_RS07750 rlmH 1572525..1573004 (+) 480 WP_012028058.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  QNH65_RS07755 - 1573029..1573712 (+) 684 WP_012775416.1 YoaK family protein -

Sequence


Protein


Download         Length: 254 a.a.        Molecular weight: 28966.21 Da        Isoelectric Point: 9.1678

>NTDB_id=1155480 QNH65_RS07740 WP_014638879.1 1570330..1571094(-) (spo0J) [Streptococcus suis isolate 861160_LM_A]
MEELRTLNISEIHPNPYQPRIHFDEKELLELAQSIKENGLIQPIIVRKSSIIGYELLAGERRLRASQLAGLTTIPAVVKE
LTDDDLLYQAIIENLQRSNLNPIEEAASYQKLISRGLTHDEVAQIMGKSRPYISNLLRLLNLSSQTKQAVEEGQISQGHA
RQLVSFSEEKQAEWVQLILSKDLSVRTLEKLIAANKKKHTKLKQRDQFLKEQEDSLSKTLGTATKIIKKKNGSGEIRISF
NDLDEFERIINNFK

Nucleotide


Download         Length: 765 bp        

>NTDB_id=1155480 QNH65_RS07740 WP_014638879.1 1570330..1571094(-) (spo0J) [Streptococcus suis isolate 861160_LM_A]
ATGGAAGAATTACGTACACTAAATATTTCAGAAATCCATCCCAATCCCTATCAGCCAAGAATTCATTTTGATGAAAAGGA
GCTACTTGAGCTCGCTCAATCCATTAAGGAAAATGGATTAATTCAACCGATTATTGTAAGAAAATCTTCTATTATCGGAT
ACGAATTATTAGCTGGAGAAAGAAGGTTGCGAGCCAGTCAATTAGCTGGACTGACTACAATACCAGCAGTGGTAAAGGAA
CTAACTGATGATGATTTACTATATCAGGCTATCATAGAGAATCTACAGCGTTCTAACTTAAATCCGATAGAAGAAGCAGC
CTCTTATCAAAAATTGATTAGTAGAGGGTTAACGCATGATGAAGTTGCTCAAATCATGGGAAAATCAAGACCATATATCA
GTAATTTATTGCGCCTACTAAATCTATCATCTCAGACTAAACAAGCTGTAGAAGAAGGACAAATTTCACAAGGGCACGCG
CGACAATTGGTGTCATTTTCAGAAGAAAAGCAAGCCGAATGGGTTCAACTCATTTTATCAAAAGATTTAAGTGTGCGTAC
GCTTGAAAAATTAATAGCTGCAAATAAGAAAAAACACACTAAGCTTAAACAACGCGACCAATTTTTAAAAGAACAGGAAG
ATTCACTCAGTAAAACTCTTGGAACAGCTACAAAAATTATCAAGAAGAAAAACGGGAGCGGAGAAATTCGGATTAGCTTT
AATGACCTCGATGAATTCGAAAGAATTATCAACAATTTTAAATAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB G7SHV5

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

55.159

99.213

0.547


Multiple sequence alignment