Detailed information NTG1154775

Bioinformatically predicted

Overview

• Name: recB
• Type: Machinery gene
• Locus tag: OGY80_RS11110
• Genome accession: NZ_OX336253
• Coordinates: 2276689..2280345 (-)
• Length: 1218 a.a.
• NCBI ID: WP_263341645.1
• Uniprot ID: -
• Organism: Neisseria sp. Marseille-Q5346
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2271689..2285345

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OGY80_RS11090	-	2272373..2273209 (-)	837	WP_263341639.1	DUF4198 domain-containing protein	-
OGY80_RS11095	-	2273597..2274646 (+)	1050	WP_263341941.1	sulfate ABC transporter substrate-binding protein	-
OGY80_RS11100	dinB	2274724..2275782 (+)	1059	WP_263341641.1	DNA polymerase IV	-
OGY80_RS11105	-	2275898..2276629 (+)	732	WP_263341643.1	phosphoadenylyl-sulfate reductase	-
OGY80_RS11110	recB	2276689..2280345 (-)	3657	WP_263341645.1	exodeoxyribonuclease V subunit beta	Machinery gene
OGY80_RS11115	-	2280490..2284248 (-)	3759	WP_263341647.1	hemagglutinin repeat-containing protein	-

Sequence

Protein

• Length: 1218 a.a.
• Molecular weight: 138366.41 Da
• Isoelectric Point: 5.5302

>NTDB_id=1154775 OGY80_RS11110 WP_263341645.1 2276689..2280345(-) (recB) [Neisseria sp. Marseille-Q5346]
MSSALPFDALTLSIDGTNLIEASAGTGKTYGIAALFTRLIVLEKKDIEKILVVTFTKAATAELKTRLRARLDEVLQVLNE
IQTLGGEPEHISDGLNKYYEKEKKSPDDFLNRLIPLALGEQDGQESCHRLILRLKAALSQFDNASIYTIHGFCQRVLRDY
AFLCGAPLDVELSDDSRERLLIPAQDFWRQKVATDATLAQLVFDRKYTPEEMLAEIKSYTGRPYLKFRRPEGDLKETQAN
LQETWQKICGQLEDLEKAFWTILPKLNGQTYKRKTFENVFTDLKTNAESNRLPRLSKQTLEKLNHFSVDTLNSKLKKEYK
ADADAPEIIQLQALANLGRDLQAMESAEEAVFICLQLDLLSYINQSIAEQKKSRRERVFDDLLLDVHQALTTNEHGNALT
KAAAANWEIALIDEFQDTDPLQYEIFRQIFIEQGCPLFLVGDPKQAIYSFRGADIYAYLQAAQDADRHYTLAVNYRSHAK
LINGISALFKQKKHPFVLENIDYSDVSASRAESRLSPHRPAIQVRWLNTDDQTGKEILRSRAAEYCADEIAFALNEAAEG
RLNFKGRALESGDIAVLVRTNNEAAMIAGKLKQRRIQSVLLSRQSVFDSAEADSLSALIGFWLNPRQTDWLRFVLTGVLF
VYTAKEIYELNHNEHQLLKWLESSAEAMEKWRKGGIFAAVQQFAARHDIETRLLKGGNERSLTNYYQILELLAEEDSQSR
NPATLHKWLNEQISRARSGHFPSDAQTIRLESDEKLVKIVTMHASKGLQYPLVYCPFAWDTKDNSKENWKILHTENHETE
LLAKSQTSEAELSHLADEKTAEDLRLLYVALTRAEEQLNIYAAANKNCTPNNPFAYLLEGLPDAGRESVSQSYKSATDVV
EMLKTNWQRFIKNAPENTEFAFTEEAPLETVYQYSRQQDQALSAHSIKHRDFDFIRHTSFTGLSRHTKSTDEQHEPLQPA
IDPAESADRAMPSENLPSPLSDGLDIHHFPRGTNAGVCLHEMLEKLDFAASAESQSEMIAEVLQRHSFEDKWLPTVSAML
DTCRLTPLIGESLSQIPPTRRLPEMGFTLYMDDFKLDDLRRWFASSEANLPPECVQAAQLLDFHDLQGYLNGFIDMVCQD
SDGNVVLIDYKSNHLGNDASAYTQQAMNEAVAHHHYYLQALIYAVAIARYYALRGKPLPKIAIRYLFLRGMDGSDRGIWK
WDIDTALLSTFVERKTNS

Nucleotide

• Length: 3657 bp

>NTDB_id=1154775 OGY80_RS11110 WP_263341645.1 2276689..2280345(-) (recB) [Neisseria sp. Marseille-Q5346]
ATGTCTTCCGCCCTTCCTTTTGATGCGCTCACACTTTCCATCGACGGCACCAACCTCATCGAAGCTTCTGCCGGTACGGG
TAAAACCTACGGCATTGCCGCGCTCTTTACCCGACTGATTGTTTTAGAAAAAAAAGACATCGAGAAAATTCTGGTCGTTA
CCTTTACCAAAGCGGCGACGGCAGAACTGAAAACCCGTTTGCGTGCGCGTTTGGACGAAGTATTGCAGGTTTTGAACGAA
ATCCAAACCTTGGGCGGCGAGCCGGAACATATTTCAGACGGCCTGAACAAATATTACGAAAAAGAAAAAAAATCTCCCGA
TGACTTTCTCAATCGCTTGATTCCTTTGGCTTTAGGCGAGCAAGACGGACAGGAAAGCTGCCATCGCCTGATTCTCCGCC
TCAAAGCCGCGCTGAGCCAGTTTGACAACGCCTCGATTTACACCATCCACGGCTTCTGTCAGCGCGTCTTGCGCGATTAC
GCGTTTTTGTGCGGCGCGCCTTTGGATGTCGAGCTGTCGGACGACTCGCGCGAGAGGCTGCTGATTCCTGCGCAAGACTT
TTGGCGGCAAAAAGTGGCAACCGATGCCACATTGGCACAATTGGTTTTTGACCGGAAATACACGCCCGAAGAAATGCTTG
CCGAAATCAAAAGCTATACCGGCCGCCCCTATCTGAAATTCAGACGGCCTGAAGGCGATTTGAAAGAAACCCAAGCCAAC
CTTCAAGAAACATGGCAAAAAATTTGCGGCCAGTTGGAAGACTTGGAAAAAGCGTTTTGGACAATCTTGCCCAAACTTAA
CGGCCAAACCTACAAAAGAAAAACCTTTGAAAATGTTTTTACCGATTTAAAAACAAACGCCGAATCCAACCGTCTGCCCC
GCCTGAGCAAACAAACGCTAGAAAAATTAAACCATTTCAGTGTCGATACACTCAACAGCAAACTGAAAAAAGAATATAAA
GCTGATGCCGATGCGCCGGAAATTATTCAGCTGCAAGCCTTAGCCAATCTTGGTCGTGATTTGCAGGCAATGGAAAGCGC
GGAAGAAGCAGTCTTCATCTGCCTGCAACTCGACCTCCTTTCCTACATCAACCAATCCATTGCCGAACAAAAAAAATCAC
GCCGTGAGCGCGTGTTTGATGATTTGCTGCTGGACGTCCATCAGGCATTGACCACCAATGAACACGGCAACGCGTTGACA
AAAGCGGCGGCGGCAAACTGGGAAATCGCGCTGATTGACGAATTCCAAGATACCGACCCGCTGCAATACGAAATTTTCCG
CCAAATTTTTATCGAACAAGGCTGCCCGCTGTTTCTCGTTGGCGACCCCAAGCAGGCGATTTACAGCTTTCGCGGTGCGG
ACATTTACGCCTATCTGCAAGCTGCGCAAGATGCGGACAGGCATTACACCCTCGCCGTCAACTACCGCAGCCATGCCAAG
CTGATTAACGGCATCAGCGCCTTGTTCAAACAAAAAAAACACCCCTTTGTATTGGAAAACATCGATTACAGCGATGTCTC
CGCCAGCCGCGCCGAAAGCCGGCTGTCGCCACACCGCCCCGCCATCCAAGTGCGCTGGCTCAATACAGACGATCAAACCG
GCAAAGAGATTTTGCGCAGCCGAGCCGCCGAATATTGCGCCGATGAAATTGCCTTTGCGCTCAATGAAGCAGCCGAAGGC
CGTCTGAATTTCAAAGGCCGCGCGCTGGAATCCGGCGACATTGCCGTCTTGGTGCGTACCAACAACGAAGCGGCGATGAT
TGCAGGGAAACTGAAACAGCGCCGTATCCAAAGCGTGTTGCTGTCGCGCCAGTCCGTTTTCGATTCCGCCGAGGCAGACT
CGCTGTCCGCGCTGATCGGCTTTTGGCTCAACCCAAGGCAAACCGACTGGCTGCGCTTTGTCTTGACCGGCGTTTTGTTC
GTCTATACCGCCAAAGAGATTTACGAACTCAACCACAACGAACACCAGCTGCTCAAATGGCTGGAGTCGTCTGCCGAGGC
CATGGAAAAATGGCGGAAAGGCGGCATTTTTGCCGCCGTGCAGCAGTTTGCCGCCCGACATGACATCGAAACACGCCTGC
TCAAAGGCGGCAACGAACGCAGCCTGACCAACTACTATCAAATTCTGGAGCTTTTGGCCGAAGAAGACAGCCAAAGCCGC
AACCCTGCCACCCTGCATAAATGGTTAAACGAACAAATCAGCCGTGCGCGCAGCGGCCATTTCCCGTCAGACGCGCAAAC
CATCCGTCTCGAAAGCGACGAAAAACTGGTCAAAATCGTTACCATGCACGCGTCGAAAGGTTTGCAATATCCTTTGGTGT
ACTGCCCCTTCGCGTGGGATACCAAAGACAATTCCAAAGAAAACTGGAAAATCCTGCATACTGAAAACCACGAAACCGAG
CTGCTGGCCAAATCTCAAACCTCGGAAGCAGAACTAAGCCATCTTGCCGACGAAAAGACGGCAGAAGATTTGCGTCTGCT
CTATGTTGCCCTTACCCGCGCCGAAGAACAGCTCAACATCTACGCCGCCGCCAACAAAAACTGTACGCCAAACAATCCTT
TTGCCTATCTGCTCGAAGGTTTACCGGATGCCGGCCGCGAAAGCGTCAGCCAAAGCTATAAAAGCGCGACAGACGTTGTG
GAAATGCTTAAAACCAACTGGCAACGCTTTATCAAAAACGCGCCTGAAAATACGGAGTTTGCCTTCACGGAAGAAGCCCC
GCTAGAAACCGTCTACCAATACAGCCGTCAACAAGACCAAGCTTTGAGCGCTCATAGCATCAAACACCGCGATTTTGACT
TTATCCGCCACACCAGCTTTACCGGTTTGAGCAGACATACCAAGTCAACCGACGAACAACACGAGCCTTTGCAACCTGCC
ATCGACCCGGCAGAAAGCGCAGACCGTGCCATGCCGTCTGAAAACCTGCCTTCCCCACTTTCAGACGGCCTCGATATCCA
CCATTTCCCCCGAGGCACCAATGCCGGCGTATGTTTGCATGAAATGTTGGAAAAACTCGACTTCGCCGCCTCTGCCGAGA
GCCAATCCGAAATGATTGCCGAAGTTTTGCAACGCCACAGCTTTGAAGACAAATGGCTGCCGACGGTAAGCGCCATGCTC
GATACCTGCCGCCTGACGCCTTTAATCGGCGAGAGCCTGTCGCAGATTCCGCCGACCCGACGCCTGCCCGAAATGGGATT
CACCCTGTACATGGATGATTTCAAACTGGACGACTTGCGCCGTTGGTTTGCTTCAAGCGAAGCAAACCTGCCACCCGAAT
GCGTCCAAGCCGCGCAACTGCTTGATTTCCATGATTTACAAGGCTATTTGAACGGCTTCATCGATATGGTTTGTCAAGAT
TCTGACGGCAATGTCGTTTTAATCGACTACAAATCCAACCATTTGGGCAATGATGCAAGCGCGTACACGCAACAGGCGAT
GAACGAAGCCGTGGCGCATCATCACTACTACCTGCAAGCCCTAATCTACGCCGTTGCCATCGCGCGCTACTATGCCCTGC
GCGGCAAGCCGTTGCCCAAAATCGCCATCCGCTACCTCTTCCTACGCGGCATGGACGGCTCGGATAGAGGCATTTGGAAA
TGGGACATCGATACCGCCCTGCTTTCCACTTTTGTTGAACGAAAAACAAATTCTTGA

Domains

Predicted by InterproScan.

• UvrD/REP helicase N-terminal domain (UvrD-helicase) (13-465)

• PD-(D/E)XK nuclease superfamily (PDDEXK_1) (996-1190)

• UvrD-like helicase C-terminal domain (UvrD_C) (469-842)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recB	Neisseria gonorrhoeae strain FA1090	60.481	99.097	0.599