Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   OGY80_RS09630 Genome accession   NZ_OX336253
Coordinates   1997859..1998320 (-) Length   153 a.a.
NCBI ID   WP_070734648.1    Uniprot ID   -
Organism   Neisseria sp. Marseille-Q5346     
Function   inhibition of RecA (predicted from homology)   
Competence regulation

Genomic Context

Location: 1992859..2003320
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OGY80_RS09605 - 1993636..1994196 (-) 561 WP_003682296.1 adenine phosphoribosyltransferase -
  OGY80_RS09610 gmk 1994365..1994982 (+) 618 WP_063067948.1 guanylate kinase -
  OGY80_RS09615 rpoZ 1995035..1995241 (+) 207 WP_003682294.1 DNA-directed RNA polymerase subunit omega -
  OGY80_RS09620 - 1995346..1997502 (+) 2157 WP_263341143.1 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase -
  OGY80_RS09625 - 1997622..1997783 (-) 162 WP_039861975.1 hypothetical protein -
  OGY80_RS09630 recX 1997859..1998320 (-) 462 WP_070734648.1 recombination regulator RecX Regulator
  OGY80_RS09635 - 1998420..1999133 (-) 714 WP_263341148.1 phosphoglycolate phosphatase -
  OGY80_RS09640 - 1999555..2000820 (+) 1266 WP_107723550.1 Glu/Leu/Phe/Val dehydrogenase -
  OGY80_RS09645 - 2000981..2001796 (+) 816 WP_070607922.1 FKBP-type peptidyl-prolyl cis-trans isomerase -
  OGY80_RS09650 purN 2001894..2002520 (+) 627 WP_263341916.1 phosphoribosylglycinamide formyltransferase -
  OGY80_RS09655 - 2002551..2003219 (+) 669 WP_070765107.1 DUF3108 domain-containing protein -

Sequence

Protein


Download         Length: 153 a.a.        Molecular weight: 17933.15 Da        Isoelectric Point: 7.1699

>NTDB_id=1154771 OGY80_RS09630 WP_070734648.1 1997859..1998320(-) (recX) [Neisseria sp. Marseille-Q5346]
MKPPKTLRARALDILSRQEVSRVGLKRKLAPHAESEEELEKVLDEFVERNWQSDQRYAEAYIHSKSNRYGTLRLKQALAQ
QGIDADDCREFLPDREDELQTAISVLRKKFKQEAQDLKEKQKQARFLAYRGFGADTIQTALKTAWNEDEDFYQ

Nucleotide


Download         Length: 462 bp        

>NTDB_id=1154771 OGY80_RS09630 WP_070734648.1 1997859..1998320(-) (recX) [Neisseria sp. Marseille-Q5346]
ATGAAACCTCCCAAAACCTTACGCGCCCGCGCCTTGGATATTCTTTCCCGTCAAGAAGTCAGCCGTGTCGGCTTGAAACG
CAAACTGGCTCCGCACGCTGAAAGCGAAGAAGAATTGGAAAAGGTTTTGGACGAATTCGTCGAACGAAATTGGCAATCCG
ACCAACGTTACGCAGAAGCCTATATTCACAGCAAAAGCAACCGTTACGGCACGCTCCGCCTCAAGCAAGCCTTGGCACAA
CAAGGCATTGATGCAGACGACTGTCGGGAGTTCCTACCCGATAGGGAGGACGAGCTGCAAACCGCTATTTCCGTCTTGCG
TAAAAAATTCAAGCAAGAAGCCCAAGATTTGAAAGAAAAACAAAAACAAGCGCGTTTCCTTGCTTATCGCGGCTTTGGTG
CCGATACCATTCAGACGGCCTTAAAAACGGCGTGGAATGAAGACGAAGACTTCTATCAATAA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(30-143)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Neisseria gonorrhoeae strain FA1090

77.703

96.732

0.752

Multiple sequence alignment