Detailed information NTG1154277

Bioinformatically predicted

Overview

• Name: ceuB
• Type: Machinery gene
• Locus tag: NNL35_RS29195
• Genome accession: NZ_OX216966
• Coordinates: 6490179..6491132 (-)
• Length: 317 a.a.
• NCBI ID: WP_006679306.1
• Uniprot ID: H3SMN0
• Organism: Paenibacillus dendritiformis isolate ena-SAMPLE-TAB-03-06-2022-11:19:07:959-6672
• Function: DNA uptake (predicted from homology) DNA binding and uptake

Genomic Context

Location: 6485179..6496132

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NNL35_RS29170 (H7S4_005834)	-	6485499..6485674 (-)	176	Protein_5796	IS256 family transposase	-
NNL35_RS29175 (H7S4_005835)	-	6485870..6487159 (-)	1290	WP_006679310.1	helix-turn-helix domain-containing protein	-
NNL35_RS29180 (H7S4_005836)	-	6487402..6488364 (-)	963	WP_006679309.1	siderophore ABC transporter substrate-binding protein	-
NNL35_RS29185 (H7S4_005837)	-	6488487..6489245 (-)	759	WP_006679308.1	ABC transporter ATP-binding protein	-
NNL35_RS29190 (H7S4_005838)	-	6489239..6490189 (-)	951	WP_006679307.1	iron chelate uptake ABC transporter family permease subunit	-
NNL35_RS29195 (H7S4_005839)	ceuB	6490179..6491132 (-)	954	WP_006679306.1	ABC transporter permease	Machinery gene
NNL35_RS29200 (H7S4_005840)	-	6491592..6492779 (-)	1188	WP_006679305.1	dicarboxylate/amino acid:cation symporter	-
NNL35_RS29205 (H7S4_005841)	-	6492963..6493232 (-)	270	WP_006679304.1	YqkE family protein	-
NNL35_RS29210 (H7S4_005842)	-	6493489..6494043 (+)	555	WP_006679303.1	PadR family transcriptional regulator	-
NNL35_RS29215 (H7S4_005843)	-	6494056..6494529 (+)	474	WP_006679302.1	DUF4188 domain-containing protein	-
NNL35_RS29220 (H7S4_005844)	infC	6494588..6495076 (-)	489	WP_006679301.1	translation initiation factor IF-3	-
NNL35_RS29225 (H7S4_005845)	-	6495140..6495472 (+)	333	WP_006679300.1	hypothetical protein	-

Sequence

Protein

• Length: 317 a.a.
• Molecular weight: 35295.71 Da
• Isoelectric Point: 10.1878

>NTDB_id=1154277 NNL35_RS29195 WP_006679306.1 6490179..6491132(-) (ceuB) [Paenibacillus dendritiformis isolate ena-SAMPLE-TAB-03-06-2022-11:19:07:959-6672]
MKKRYLVIALILFSFISLFIGVIDIKPWDLFNLNDDKVHTFLVSRVPRLISIILAGVSMSICGLIMQQLSRNKFVSPTTA
GTLDSARLGILVSLMLFTTASPLVKMLVAFVFALIGTMLFMKILDRIKFKDTIFIPLVGLMFGNIISSISTFFAYKYDLI
QNMSSWLQGDFSMIIKGRYELLYISIPLIVIAYLYANKFTVAGMGEDFSKNLGLNYKRVVNIGLILVALVTCTVVLTVGT
IPFLGLIIPNIVSIYRGDNLKNSLSHTALLGAVFVLFCDILGRIIIFPYELSISLTVGVIGSAIFVYMLMRRRAHGL

Nucleotide

• Length: 954 bp

>NTDB_id=1154277 NNL35_RS29195 WP_006679306.1 6490179..6491132(-) (ceuB) [Paenibacillus dendritiformis isolate ena-SAMPLE-TAB-03-06-2022-11:19:07:959-6672]
ATGAAGAAGAGATATCTGGTTATTGCGCTTATCCTGTTTTCCTTTATTTCCCTGTTTATCGGGGTCATAGACATTAAGCC
ATGGGATTTGTTCAATCTGAACGACGACAAGGTTCATACTTTTCTCGTCAGTCGGGTGCCAAGGCTTATCAGCATCATTC
TCGCCGGGGTCAGCATGAGCATATGCGGCCTGATTATGCAGCAGCTCAGCCGGAACAAGTTCGTCTCGCCCACGACGGCA
GGGACGCTTGATTCGGCCCGCTTGGGGATACTCGTCTCCTTGATGCTGTTCACGACGGCGAGCCCGTTGGTGAAGATGCT
CGTAGCGTTCGTCTTCGCTTTGATAGGCACGATGCTGTTCATGAAAATACTGGATCGAATCAAATTCAAAGATACCATCT
TCATTCCGCTCGTCGGATTGATGTTCGGGAATATTATCAGTTCCATTTCCACCTTTTTCGCTTACAAGTATGATTTGATT
CAGAACATGTCCTCATGGCTGCAGGGCGACTTCTCGATGATTATCAAGGGGCGCTATGAGCTGCTGTATATCAGCATTCC
GCTTATCGTAATTGCATACCTGTATGCGAATAAGTTCACGGTAGCGGGGATGGGCGAGGATTTCTCGAAAAACCTCGGGC
TCAACTACAAGCGCGTGGTCAACATTGGCTTGATCCTGGTCGCGCTCGTTACGTGCACGGTCGTGCTTACCGTTGGGACG
ATTCCTTTCCTGGGTCTCATTATTCCGAATATCGTCTCCATTTACAGAGGCGATAATTTGAAGAATAGCTTGTCGCATAC
CGCGCTTCTCGGGGCCGTATTCGTTCTGTTCTGCGATATATTGGGGCGCATCATCATCTTCCCGTATGAATTGTCGATCA
GCTTGACCGTCGGTGTCATCGGAAGCGCCATTTTCGTCTATATGTTAATGAGGAGAAGGGCACATGGGTTATAA

Domains

Predicted by InterproScan.

• FecCD transport family (FecCD) (10-311)

3D structure

• AlphaFold DB: H3SMN0

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ceuB	Campylobacter jejuni subsp. jejuni 81-176	53.355	98.738	0.527