Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   NB068_RS04250 Genome accession   NZ_OW969598
Coordinates   858301..858762 (+) Length   153 a.a.
NCBI ID   WP_250314167.1    Uniprot ID   -
Organism   Neisseria sp. Marseille-Q6792     
Function   inhibition of RecA (predicted from homology)   
Competence regulation

Genomic Context

Location: 853301..863762
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NB068_RS04225 - 854009..855223 (-) 1215 WP_250314165.1 pyridoxal phosphate-dependent aminotransferase -
  NB068_RS04230 - 855311..855520 (-) 210 WP_003674694.1 2-hydroxymuconate tautomerase family protein -
  NB068_RS04235 - 855631..855840 (+) 210 Protein_825 hypothetical protein -
  NB068_RS04240 - 855871..857136 (-) 1266 WP_039853869.1 Glu/Leu/Phe/Val dehydrogenase -
  NB068_RS04245 - 857537..858244 (+) 708 WP_250314166.1 phosphoglycolate phosphatase -
  NB068_RS04250 recX 858301..858762 (+) 462 WP_250314167.1 recombination regulator RecX Regulator
  NB068_RS04255 - 858836..858997 (+) 162 WP_003674702.1 hypothetical protein -
  NB068_RS04260 - 859150..859632 (+) 483 WP_101122846.1 acyl-CoA thioesterase -
  NB068_RS04265 - 859752..860765 (-) 1014 WP_250314168.1 peptidoglycan DD-metalloendopeptidase family protein -
  NB068_RS04270 surE 860868..861614 (-) 747 WP_250314169.1 5'/3'-nucleotidase SurE -
  NB068_RS04275 - 861628..863184 (-) 1557 WP_250314170.1 TerC family protein -

Sequence

Protein


Download         Length: 153 a.a.        Molecular weight: 17847.15 Da        Isoelectric Point: 9.4180

>NTDB_id=1153539 NB068_RS04250 WP_250314167.1 858301..858762(+) (recX) [Neisseria sp. Marseille-Q6792]
MKPQKSLRARAMDILSRQEVSRLGLQRKLAPHAESEEELENVLNEFSERNWQSDLRYAEAYIHSKSRKHGSLRLKQALAQ
QGIDEETSRKLLPDRLSEKQTAMDVLRKKFKHPAADLKEKQKQARFLAYRGFDADTVQTALKHAWDDGWEEDC

Nucleotide


Download         Length: 462 bp        

>NTDB_id=1153539 NB068_RS04250 WP_250314167.1 858301..858762(+) (recX) [Neisseria sp. Marseille-Q6792]
ATGAAACCGCAAAAATCCCTACGCGCCCGCGCGATGGACATCCTCTCGCGCCAAGAAGTCAGTCGCCTCGGGCTGCAGCG
CAAGCTCGCCCCCCATGCCGAAAGCGAAGAAGAGTTGGAAAACGTCTTGAACGAATTTTCCGAACGCAACTGGCAGTCGG
ATTTACGCTATGCAGAAGCCTATATCCACAGCAAAAGCCGCAAACACGGCTCCCTGCGCCTGAAACAAGCCCTGGCTCAA
CAGGGCATAGACGAAGAGACAAGCCGAAAGCTGCTTCCGGACAGGTTGAGTGAAAAACAAACCGCCATGGACGTGTTGCG
TAAAAAATTCAAACATCCGGCCGCCGACCTTAAAGAAAAACAAAAACAGGCACGCTTCCTCGCCTATCGCGGTTTTGATG
CCGATACCGTTCAGACGGCATTGAAACATGCCTGGGATGACGGCTGGGAGGAAGACTGCTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(30-143)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Neisseria gonorrhoeae strain FA1090

90.196

100

0.902

Multiple sequence alignment