Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | NBW44_RS08400 | Genome accession | NZ_OW724079 |
| Coordinates | 1641773..1644205 (+) | Length | 810 a.a. |
| NCBI ID | WP_250307936.1 | Uniprot ID | - |
| Organism | Streptococcus sp. Marseille-Q3533 | ||
| Function | degradation of ComW (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1636773..1649205
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NBW44_RS08355 | - | 1636905..1637195 (+) | 291 | WP_250307927.1 | MTH1187 family thiamine-binding protein | - |
| NBW44_RS08360 | - | 1637158..1637916 (+) | 759 | WP_250307928.1 | ABC transporter permease | - |
| NBW44_RS08365 | - | 1637953..1638960 (+) | 1008 | WP_250307929.1 | ABC transporter substrate-binding protein | - |
| NBW44_RS08370 | - | 1638960..1639688 (+) | 729 | WP_250307930.1 | ABC transporter ATP-binding protein | - |
| NBW44_RS08375 | - | 1639795..1640079 (+) | 285 | WP_250307931.1 | hypothetical protein | - |
| NBW44_RS08380 | - | 1640190..1640465 (+) | 276 | WP_250307932.1 | hypothetical protein | - |
| NBW44_RS08385 | - | 1640513..1640725 (+) | 213 | WP_250307933.1 | hypothetical protein | - |
| NBW44_RS08390 | - | 1640776..1641078 (+) | 303 | WP_349815554.1 | hypothetical protein | - |
| NBW44_RS08395 | - | 1641308..1641766 (+) | 459 | WP_250307935.1 | CtsR family transcriptional regulator | - |
| NBW44_RS08400 | clpC | 1641773..1644205 (+) | 2433 | WP_250307936.1 | ATP-dependent Clp protease ATP-binding subunit | Regulator |
| NBW44_RS08405 | - | 1644279..1645052 (+) | 774 | WP_250307937.1 | NUDIX hydrolase | - |
| NBW44_RS08410 | - | 1645088..1645318 (-) | 231 | WP_004254045.1 | hypothetical protein | - |
| NBW44_RS08415 | - | 1645644..1646351 (+) | 708 | WP_250307938.1 | hypothetical protein | - |
| NBW44_RS08420 | dusB | 1646431..1647411 (-) | 981 | WP_250307939.1 | tRNA dihydrouridine synthase DusB | - |
| NBW44_RS08425 | hslO | 1647398..1648270 (-) | 873 | WP_250307940.1 | Hsp33 family molecular chaperone HslO | - |
| NBW44_RS08430 | - | 1648553..1648684 (+) | 132 | WP_142559348.1 | teichoic acid D-Ala incorporation-associated protein DltX | - |
Sequence
Protein
Download Length: 810 a.a. Molecular weight: 90259.03 Da Isoelectric Point: 6.1806
>NTDB_id=1152624 NBW44_RS08400 WP_250307936.1 1641773..1644205(+) (clpC) [Streptococcus sp. Marseille-Q3533]
MKYSKALKECIDSAFLVASHYEAEYLESWHLLIAMANHNYSVAGATLNEFPYEIDRLEEVAAELTEAKQGDKEEYQELSF
SHRLKVLFLEAEHIASVVHAKFLGTEHVLYAILHDGNALATRILEQSGFSYEDKKDQVKIAGLRRKLEARAGWTREDLKA
LRQRHRSVADKQNSMANMMGMPQNTSGGLEDYTHDLTEQARSGKLEPVIGRDQEISRMIQILSRKTKNNPVLVGDAGVGK
TALALGLAQRIASGDVPVEMAKMRVLELDLMNVVAGTRFRGDFEERMNNIIKDIEEDGQIILFIDELHTIMGSGSGIDST
LDAANILKPALARGTLRTVGATTQEEYQKHIEKDAALSRRFAKVTIEEPSLADSIEILQGLKSTYEKHHHVQITDDAVDT
AVKMAHRYLTSRHLPDSAIDLLDEAAATVQNKSKYGKNAESGLSAADKAMMDGKWKQAAQLIAKEQELPVYKDSVTESDI
LTTLSRLSGIPVQKLTQTDAKKYLNLEAELHKRVIGQEQAVSSISRAIRRNQSGIRNNKRPIGSFMFLGPTGVGKTELAK
ALAEVLFDDESALIRFDMSEYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSVLLFDEVEKAHPDIFNVLLQVLDD
GVLTDSKGRKVDFSNTIIIMTSNLGATSLRDDKTVGFGARDIRFDQENMEKRMFEELKKAYRPEFINRIDEKVVFHSLSS
QDMQEVVKIMVKPLIASLAEKGVDLKLQASALKLLAQHGYDPEMGARPLRRTLQTEVEDKLAELLLKGELEAGKTLKIGV
KAGQLKFDIV
MKYSKALKECIDSAFLVASHYEAEYLESWHLLIAMANHNYSVAGATLNEFPYEIDRLEEVAAELTEAKQGDKEEYQELSF
SHRLKVLFLEAEHIASVVHAKFLGTEHVLYAILHDGNALATRILEQSGFSYEDKKDQVKIAGLRRKLEARAGWTREDLKA
LRQRHRSVADKQNSMANMMGMPQNTSGGLEDYTHDLTEQARSGKLEPVIGRDQEISRMIQILSRKTKNNPVLVGDAGVGK
TALALGLAQRIASGDVPVEMAKMRVLELDLMNVVAGTRFRGDFEERMNNIIKDIEEDGQIILFIDELHTIMGSGSGIDST
LDAANILKPALARGTLRTVGATTQEEYQKHIEKDAALSRRFAKVTIEEPSLADSIEILQGLKSTYEKHHHVQITDDAVDT
AVKMAHRYLTSRHLPDSAIDLLDEAAATVQNKSKYGKNAESGLSAADKAMMDGKWKQAAQLIAKEQELPVYKDSVTESDI
LTTLSRLSGIPVQKLTQTDAKKYLNLEAELHKRVIGQEQAVSSISRAIRRNQSGIRNNKRPIGSFMFLGPTGVGKTELAK
ALAEVLFDDESALIRFDMSEYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSVLLFDEVEKAHPDIFNVLLQVLDD
GVLTDSKGRKVDFSNTIIIMTSNLGATSLRDDKTVGFGARDIRFDQENMEKRMFEELKKAYRPEFINRIDEKVVFHSLSS
QDMQEVVKIMVKPLIASLAEKGVDLKLQASALKLLAQHGYDPEMGARPLRRTLQTEVEDKLAELLLKGELEAGKTLKIGV
KAGQLKFDIV
Nucleotide
Download Length: 2433 bp
>NTDB_id=1152624 NBW44_RS08400 WP_250307936.1 1641773..1644205(+) (clpC) [Streptococcus sp. Marseille-Q3533]
ATGAAATATTCAAAAGCATTGAAAGAATGTATAGACAGTGCCTTTCTAGTAGCAAGTCATTATGAGGCAGAATACTTAGA
GTCTTGGCACCTATTGATTGCAATGGCAAATCATAATTACAGTGTAGCTGGGGCGACCTTAAATGAATTTCCCTATGAAA
TTGATCGTTTGGAGGAAGTTGCAGCAGAACTGACAGAGGCAAAGCAAGGCGATAAAGAAGAGTATCAGGAGCTTTCTTTT
TCACACCGTTTGAAAGTTTTGTTTCTAGAGGCTGAACATATTGCTTCTGTAGTGCATGCAAAATTTTTGGGAACTGAACA
TGTTCTCTATGCTATTTTGCATGATGGGAATGCCTTAGCTACTCGTATCCTAGAACAATCTGGATTTTCTTACGAAGATA
AGAAGGACCAGGTTAAGATTGCTGGACTTCGTCGCAAACTTGAAGCGCGTGCTGGATGGACTAGAGAAGATTTGAAGGCC
CTTCGTCAACGTCATCGTTCAGTAGCAGATAAGCAAAATTCTATGGCTAATATGATGGGAATGCCTCAAAATACGAGTGG
TGGCTTGGAGGATTATACTCATGACCTTACGGAACAAGCTCGTTCTGGCAAATTGGAACCAGTCATCGGTCGTGACCAAG
AAATTTCTCGTATGATTCAAATCTTGAGTCGGAAGACAAAGAATAATCCTGTACTAGTTGGTGACGCAGGTGTTGGTAAA
ACAGCTCTAGCACTTGGACTAGCTCAGCGAATTGCTAGTGGGGATGTACCGGTTGAAATGGCTAAGATGCGAGTCTTAGA
ACTCGATTTGATGAATGTGGTTGCAGGGACACGTTTCCGTGGTGATTTTGAAGAGCGTATGAACAACATCATTAAAGACA
TTGAGGAAGATGGTCAGATTATTCTCTTTATCGATGAGCTCCATACCATCATGGGATCGGGTAGCGGTATTGATTCGACC
TTGGATGCAGCTAACATCTTAAAACCTGCCTTGGCGCGTGGGACTCTAAGAACTGTCGGAGCTACAACCCAGGAAGAATA
TCAAAAACATATTGAAAAAGACGCAGCCCTTTCTCGTCGATTTGCCAAAGTAACTATTGAGGAGCCAAGTTTAGCAGATA
GTATTGAAATCTTACAAGGTTTGAAATCAACTTATGAAAAACACCATCATGTTCAAATTACTGATGATGCAGTCGATACA
GCTGTCAAAATGGCTCATCGTTACCTAACCAGCCGTCATTTACCAGACTCTGCTATTGATCTTTTGGACGAAGCGGCTGC
CACTGTTCAGAACAAGTCGAAATATGGAAAAAATGCTGAGTCGGGCTTGTCTGCGGCTGATAAGGCTATGATGGATGGTA
AATGGAAGCAGGCAGCTCAACTCATTGCAAAAGAACAGGAATTACCTGTCTATAAAGACTCTGTAACGGAGTCTGATATC
TTGACAACACTCAGTCGTTTGTCAGGAATCCCAGTTCAAAAATTAACTCAAACCGATGCTAAGAAGTACCTTAATTTGGA
GGCTGAACTCCACAAGCGTGTTATTGGACAAGAACAGGCGGTCTCAAGTATTAGCCGAGCTATTCGTCGTAATCAATCTG
GTATTCGCAATAACAAACGTCCGATTGGTTCCTTTATGTTCTTAGGACCAACTGGTGTCGGTAAGACAGAGTTAGCTAAG
GCCTTGGCAGAGGTCCTCTTTGATGATGAATCTGCCCTTATCCGCTTTGACATGAGTGAATACATGGAGAAATTTGCGGC
TAGCCGTCTCAATGGTGCTCCTCCAGGTTATGTAGGCTACGAAGAAGGCGGAGAGTTGACTGAAAAAGTCCGTAATAAGC
CATACTCTGTTCTGCTCTTTGATGAAGTAGAGAAGGCCCATCCAGACATCTTTAATGTCCTCTTACAAGTTTTGGACGAT
GGGGTTCTAACAGATAGCAAGGGACGCAAAGTTGACTTCTCAAATACCATCATTATTATGACATCAAACCTTGGTGCGAC
TTCCCTTCGTGATGATAAGACAGTCGGTTTTGGAGCTCGAGATATTCGTTTTGACCAGGAAAATATGGAAAAACGTATGT
TTGAAGAGTTGAAAAAAGCTTATCGTCCAGAGTTTATCAACCGTATTGACGAAAAGGTGGTCTTCCACAGCTTGTCAAGT
CAAGATATGCAGGAAGTGGTTAAGATTATGGTCAAACCTTTGATTGCAAGCTTGGCAGAAAAAGGGGTAGACTTAAAACT
TCAAGCATCTGCTCTAAAACTTTTAGCCCAACATGGCTATGATCCAGAGATGGGTGCGCGACCGCTTCGTAGAACTCTAC
AAACTGAAGTGGAAGACAAACTAGCTGAACTCTTACTCAAAGGAGAATTGGAAGCAGGCAAGACCCTTAAGATTGGTGTC
AAAGCTGGTCAATTGAAATTCGACATTGTATAA
ATGAAATATTCAAAAGCATTGAAAGAATGTATAGACAGTGCCTTTCTAGTAGCAAGTCATTATGAGGCAGAATACTTAGA
GTCTTGGCACCTATTGATTGCAATGGCAAATCATAATTACAGTGTAGCTGGGGCGACCTTAAATGAATTTCCCTATGAAA
TTGATCGTTTGGAGGAAGTTGCAGCAGAACTGACAGAGGCAAAGCAAGGCGATAAAGAAGAGTATCAGGAGCTTTCTTTT
TCACACCGTTTGAAAGTTTTGTTTCTAGAGGCTGAACATATTGCTTCTGTAGTGCATGCAAAATTTTTGGGAACTGAACA
TGTTCTCTATGCTATTTTGCATGATGGGAATGCCTTAGCTACTCGTATCCTAGAACAATCTGGATTTTCTTACGAAGATA
AGAAGGACCAGGTTAAGATTGCTGGACTTCGTCGCAAACTTGAAGCGCGTGCTGGATGGACTAGAGAAGATTTGAAGGCC
CTTCGTCAACGTCATCGTTCAGTAGCAGATAAGCAAAATTCTATGGCTAATATGATGGGAATGCCTCAAAATACGAGTGG
TGGCTTGGAGGATTATACTCATGACCTTACGGAACAAGCTCGTTCTGGCAAATTGGAACCAGTCATCGGTCGTGACCAAG
AAATTTCTCGTATGATTCAAATCTTGAGTCGGAAGACAAAGAATAATCCTGTACTAGTTGGTGACGCAGGTGTTGGTAAA
ACAGCTCTAGCACTTGGACTAGCTCAGCGAATTGCTAGTGGGGATGTACCGGTTGAAATGGCTAAGATGCGAGTCTTAGA
ACTCGATTTGATGAATGTGGTTGCAGGGACACGTTTCCGTGGTGATTTTGAAGAGCGTATGAACAACATCATTAAAGACA
TTGAGGAAGATGGTCAGATTATTCTCTTTATCGATGAGCTCCATACCATCATGGGATCGGGTAGCGGTATTGATTCGACC
TTGGATGCAGCTAACATCTTAAAACCTGCCTTGGCGCGTGGGACTCTAAGAACTGTCGGAGCTACAACCCAGGAAGAATA
TCAAAAACATATTGAAAAAGACGCAGCCCTTTCTCGTCGATTTGCCAAAGTAACTATTGAGGAGCCAAGTTTAGCAGATA
GTATTGAAATCTTACAAGGTTTGAAATCAACTTATGAAAAACACCATCATGTTCAAATTACTGATGATGCAGTCGATACA
GCTGTCAAAATGGCTCATCGTTACCTAACCAGCCGTCATTTACCAGACTCTGCTATTGATCTTTTGGACGAAGCGGCTGC
CACTGTTCAGAACAAGTCGAAATATGGAAAAAATGCTGAGTCGGGCTTGTCTGCGGCTGATAAGGCTATGATGGATGGTA
AATGGAAGCAGGCAGCTCAACTCATTGCAAAAGAACAGGAATTACCTGTCTATAAAGACTCTGTAACGGAGTCTGATATC
TTGACAACACTCAGTCGTTTGTCAGGAATCCCAGTTCAAAAATTAACTCAAACCGATGCTAAGAAGTACCTTAATTTGGA
GGCTGAACTCCACAAGCGTGTTATTGGACAAGAACAGGCGGTCTCAAGTATTAGCCGAGCTATTCGTCGTAATCAATCTG
GTATTCGCAATAACAAACGTCCGATTGGTTCCTTTATGTTCTTAGGACCAACTGGTGTCGGTAAGACAGAGTTAGCTAAG
GCCTTGGCAGAGGTCCTCTTTGATGATGAATCTGCCCTTATCCGCTTTGACATGAGTGAATACATGGAGAAATTTGCGGC
TAGCCGTCTCAATGGTGCTCCTCCAGGTTATGTAGGCTACGAAGAAGGCGGAGAGTTGACTGAAAAAGTCCGTAATAAGC
CATACTCTGTTCTGCTCTTTGATGAAGTAGAGAAGGCCCATCCAGACATCTTTAATGTCCTCTTACAAGTTTTGGACGAT
GGGGTTCTAACAGATAGCAAGGGACGCAAAGTTGACTTCTCAAATACCATCATTATTATGACATCAAACCTTGGTGCGAC
TTCCCTTCGTGATGATAAGACAGTCGGTTTTGGAGCTCGAGATATTCGTTTTGACCAGGAAAATATGGAAAAACGTATGT
TTGAAGAGTTGAAAAAAGCTTATCGTCCAGAGTTTATCAACCGTATTGACGAAAAGGTGGTCTTCCACAGCTTGTCAAGT
CAAGATATGCAGGAAGTGGTTAAGATTATGGTCAAACCTTTGATTGCAAGCTTGGCAGAAAAAGGGGTAGACTTAAAACT
TCAAGCATCTGCTCTAAAACTTTTAGCCCAACATGGCTATGATCCAGAGATGGGTGCGCGACCGCTTCGTAGAACTCTAC
AAACTGAAGTGGAAGACAAACTAGCTGAACTCTTACTCAAAGGAGAATTGGAAGCAGGCAAGACCCTTAAGATTGGTGTC
AAAGCTGGTCAATTGAAATTCGACATTGTATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Streptococcus pneumoniae Rx1 |
90.482 |
99.877 |
0.904 |
| clpC | Streptococcus pneumoniae D39 |
90.482 |
99.877 |
0.904 |
| clpC | Streptococcus pneumoniae TIGR4 |
90.482 |
99.877 |
0.904 |
| clpC | Streptococcus mutans UA159 |
68.02 |
100 |
0.683 |
| clpC | Streptococcus thermophilus LMG 18311 |
66.012 |
100 |
0.664 |
| clpC | Streptococcus thermophilus LMD-9 |
65.89 |
100 |
0.663 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
49.458 |
100 |
0.507 |
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
45.568 |
98.889 |
0.451 |
| clpE | Streptococcus mutans UA159 |
47.903 |
76.543 |
0.367 |