Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   NBW44_RS06885 Genome accession   NZ_OW724079
Coordinates   1353614..1355383 (-) Length   589 a.a.
NCBI ID   WP_250307731.1    Uniprot ID   -
Organism   Streptococcus sp. Marseille-Q3533     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1348614..1360383
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NBW44_RS06855 - 1349190..1349555 (-) 366 WP_075565532.1 Asp23/Gls24 family envelope stress response protein -
  NBW44_RS06860 rpmB 1349709..1349897 (-) 189 WP_001140948.1 50S ribosomal protein L28 -
  NBW44_RS06865 - 1350003..1350677 (-) 675 WP_250307728.1 hypothetical protein -
  NBW44_RS06870 - 1350682..1351128 (-) 447 WP_006155797.1 LytTR family DNA-binding domain-containing protein -
  NBW44_RS06875 - 1351247..1351750 (-) 504 WP_250307729.1 phosphatase PAP2 family protein -
  NBW44_RS06880 rcrQ 1351864..1353624 (-) 1761 WP_250307730.1 ABC transporter ATP-binding protein Regulator
  NBW44_RS06885 rcrP 1353614..1355383 (-) 1770 WP_250307731.1 ABC transporter ATP-binding protein Regulator
  NBW44_RS06890 - 1355367..1355828 (-) 462 WP_250307732.1 MarR family winged helix-turn-helix transcriptional regulator -
  NBW44_RS06895 - 1356037..1356720 (+) 684 WP_250307733.1 hypothetical protein -
  NBW44_RS06900 - 1356765..1357481 (-) 717 WP_061863664.1 YebC/PmpR family DNA-binding transcriptional regulator -
  NBW44_RS06905 - 1357579..1358949 (-) 1371 WP_250307734.1 MATE family efflux transporter -
  NBW44_RS06910 - 1359058..1359612 (+) 555 WP_250307735.1 GNAT family N-acetyltransferase -

Sequence

Protein


Download         Length: 589 a.a.        Molecular weight: 65453.84 Da        Isoelectric Point: 6.2836

>NTDB_id=1152613 NBW44_RS06885 WP_250307731.1 1353614..1355383(-) (rcrP) [Streptococcus sp. Marseille-Q3533]
MKKLAKRITGKEWGMILITVLFTCCSVYLELEVPTYVSKITELLGTPGTELGDLWSPATKMMGLSLLAFLSSVTVGFFAA
RVAASYTAHLRGDIFNRVLDYSQTEIKRFSIPSLLTRTTNDITQIQMLFTMGLQVVTRGPIMAIWAIGKILGKSEYWIWA
VVVAVIVNVLMTTVLMTLAFPKQSVIQKLTDKLNSITRESLTGIRVVRAYNAEEYQDKKFEEANDEVTRLNLFVSRLMAI
MNPIMMAISSGLVLAIYWIGAYLINDASLTERLPLFSDMVVFMSYAMQVVMGFLLMGALFIVLPRTLVSAGRINQVLDLH
STIENPSHPQTANSSVKGQVEYRDVTFRYSKNSEAVVEHVSFKAEAGQTIAFIGSTGSGKSTLVNLLPRFYDVSDGEILV
DGVNVQNYDLEDLRNKVGYIPQKAVLFSGDVKGNLDFGKSQETPLSETAMWQTLELAQSKNFIEDKEAGLDSEVAQGGTN
FSGGQRQRLAIARALARKPEILIFDDSFSALDYKTDRILRQVLAEKTQSMTKLIVAQRISTIMDADLILVLDQGKVVGQG
THKELLASNEVYQEIAYSQLSREELEHGK

Nucleotide


Download         Length: 1770 bp        

>NTDB_id=1152613 NBW44_RS06885 WP_250307731.1 1353614..1355383(-) (rcrP) [Streptococcus sp. Marseille-Q3533]
ATGAAGAAACTCGCTAAGCGTATCACAGGAAAAGAGTGGGGCATGATTCTAATAACTGTTCTCTTTACCTGTTGCTCGGT
CTATCTAGAGTTAGAAGTACCGACTTACGTTTCAAAAATAACAGAATTACTCGGAACGCCAGGTACGGAGTTGGGAGACC
TTTGGTCGCCAGCAACTAAGATGATGGGTTTGTCATTATTAGCCTTCCTATCATCTGTAACAGTTGGATTTTTTGCCGCT
CGAGTTGCAGCATCCTATACAGCTCATCTACGAGGCGATATTTTTAATCGTGTTTTGGATTACTCCCAGACAGAAATTAA
ACGTTTCTCAATCCCCAGTCTATTGACTCGGACGACTAATGATATCACGCAGATTCAGATGCTCTTTACCATGGGACTCC
AAGTCGTCACTCGTGGTCCTATCATGGCTATTTGGGCTATTGGTAAAATCCTTGGCAAGTCTGAATACTGGATTTGGGCA
GTAGTGGTGGCAGTCATCGTCAATGTTCTGATGACAACTGTCTTGATGACTTTGGCCTTTCCTAAACAATCTGTCATTCA
AAAATTGACAGATAAACTGAACAGTATTACTCGTGAAAGCTTGACAGGGATTCGGGTTGTTCGTGCATACAATGCTGAGG
AATATCAAGATAAGAAATTCGAAGAAGCCAATGATGAAGTCACACGACTCAATCTCTTTGTCAGTCGCTTAATGGCCATT
ATGAATCCTATTATGATGGCGATTTCTAGTGGCTTGGTCCTTGCCATTTACTGGATTGGTGCTTATCTTATCAACGACGC
TAGCTTGACAGAGCGTCTACCCCTCTTTAGCGATATGGTGGTCTTCATGTCCTATGCTATGCAAGTGGTAATGGGCTTCT
TACTCATGGGTGCTCTCTTTATCGTCTTGCCTCGTACCTTGGTTTCTGCAGGTCGTATCAATCAAGTCTTGGACCTTCAT
TCCACTATTGAAAACCCTAGTCACCCACAGACAGCAAACTCTTCTGTAAAAGGTCAAGTGGAATACCGCGACGTAACCTT
CCGCTACTCTAAAAACTCAGAAGCAGTTGTGGAACATGTCAGCTTCAAGGCAGAAGCAGGGCAAACCATTGCCTTTATCG
GCTCAACTGGTTCTGGTAAATCTACTCTAGTTAACCTCTTACCCCGTTTTTATGATGTGTCAGATGGCGAAATTCTAGTA
GACGGCGTCAATGTTCAGAATTATGACTTAGAAGATTTGCGTAATAAAGTTGGCTATATCCCTCAAAAAGCTGTGCTCTT
TTCTGGAGATGTTAAGGGCAATCTCGACTTTGGTAAGAGTCAAGAAACGCCACTAAGTGAGACGGCCATGTGGCAAACTC
TGGAATTGGCTCAATCTAAAAACTTTATAGAAGATAAGGAAGCGGGTCTTGACTCAGAAGTGGCTCAAGGTGGGACTAAC
TTCTCAGGTGGACAAAGACAGCGTCTGGCCATTGCACGCGCCTTGGCTCGTAAACCAGAGATTCTCATTTTTGATGATTC
ATTCTCAGCCTTGGACTACAAGACAGATCGTATCTTGCGTCAAGTATTAGCTGAAAAAACACAATCTATGACTAAGTTAA
TCGTTGCTCAACGCATTTCAACCATTATGGATGCAGACCTGATCTTAGTCTTGGATCAAGGTAAAGTCGTGGGACAAGGC
ACCCACAAGGAACTTCTTGCAAGCAATGAAGTTTACCAAGAAATTGCCTATTCACAACTATCGAGGGAGGAATTGGAACA
TGGAAAATAA

Domains

Predicted by InterproScan.

ABC transporter transmembrane region (ABC_membrane)

(54-292)

ABC transporter (ABC_tran)

(358-507)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

64.892

100

0.662

Multiple sequence alignment