Detailed information
Bioinformatically predicted
Overview
| Name | clpE | Type | Regulator |
| Locus tag | NBW44_RS04995 | Genome accession | NZ_OW724079 |
| Coordinates | 988220..990484 (+) | Length | 754 a.a. |
| NCBI ID | WP_250307458.1 | Uniprot ID | - |
| Organism | Streptococcus sp. Marseille-Q3533 | ||
| Function | degradation of ComX (predicted from homology) Competence regulation |
||
Genomic Context
Location: 983220..995484
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NBW44_RS04970 | - | 983968..984741 (-) | 774 | WP_250307454.1 | HAD hydrolase family protein | - |
| NBW44_RS04975 | - | 984746..985603 (-) | 858 | WP_284346426.1 | bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase | - |
| NBW44_RS04980 | - | 986131..986865 (-) | 735 | WP_250307456.1 | amino acid ABC transporter ATP-binding protein | - |
| NBW44_RS04985 | - | 986865..987548 (-) | 684 | WP_250307457.1 | amino acid ABC transporter permease | - |
| NBW44_RS04990 | - | 987748..987978 (+) | 231 | WP_004253825.1 | DUF1797 family protein | - |
| NBW44_RS04995 | clpE | 988220..990484 (+) | 2265 | WP_250307458.1 | ATP-dependent Clp protease ATP-binding subunit | Regulator |
| NBW44_RS05000 | - | 990569..991018 (+) | 450 | WP_250307459.1 | NUDIX hydrolase | - |
| NBW44_RS05005 | - | 991082..991381 (+) | 300 | WP_250307460.1 | DUF1827 family protein | - |
| NBW44_RS05010 | - | 991639..992271 (+) | 633 | WP_250307461.1 | GNAT family N-acetyltransferase | - |
| NBW44_RS05015 | metK | 992331..993521 (-) | 1191 | WP_250307462.1 | methionine adenosyltransferase | - |
| NBW44_RS05020 | - | 993758..994456 (-) | 699 | WP_006153641.1 | GntR family transcriptional regulator | - |
Sequence
Protein
Download Length: 754 a.a. Molecular weight: 83687.12 Da Isoelectric Point: 5.0691
>NTDB_id=1152603 NBW44_RS04995 WP_250307458.1 988220..990484(+) (clpE) [Streptococcus sp. Marseille-Q3533]
MLCQNCKINDSTIHLYTNLNGKQKQIDLCQNCYKIIKTDPNNSLFKGITDLSNRDFDPLSDFFNDISNFQPTSNNTPPTQ
SGGGFGGNGGFGGNGSFGSPNRGPAQTPPPNKEKGLLDEYGINVTEIARQGKIDPVIGRDEEIIRVIEILNRRTKNNPVL
IGEPGVGKTAVVEGLAQKIVDGDVPHKLQGKEVIRLDVVSLVQGTGIRGQFEERMQKLMEEIRKREDIILFIDEIHEIVG
AGSAGDGNMDAGNILKPALARGELQLVGATTLNEYRIIEKDAALERRMQPVKVDEPTVEETITILKGIQKKYEDYHHVHY
TDSAIEAAATLSNRYIQDRFLPDKAIDLLDEAGSKMNLTLNFVDPKVIDQRLIEAENLKAQATRDEDFEKAAYFRDQIAK
YKEMQKTKVTDQDTPIISEKTIEHIIEQKTNIPVGDLKEKEQSQLINLADDLKAHVIGQDDAVDKLAKAIRRNRVGLGTP
NRPIGSFLFVGPTGVGKTELSKQLAIELFGSADSMIRFDMSEYMEKHSVAKLVGAPPGYVGYDEAGQLTEKVRRNPYSLI
LLDEVEKAHPDVMHMFLQVLDDGRLTDGQGRTVSFKDAIIIMTSNAGTGKAEASVGFGAAREGRTNSVLGELGNFFSPEF
MNRFDGIIEFKALNKENLLQIVDLMLDDVNKRLASNNISLEVTDKVKEKLVDLGYDPKMGARPLRRTIQDNIEDAITDFY
LENPTEKELKAVMISNGKIMIKSKNKLEKVEATD
MLCQNCKINDSTIHLYTNLNGKQKQIDLCQNCYKIIKTDPNNSLFKGITDLSNRDFDPLSDFFNDISNFQPTSNNTPPTQ
SGGGFGGNGGFGGNGSFGSPNRGPAQTPPPNKEKGLLDEYGINVTEIARQGKIDPVIGRDEEIIRVIEILNRRTKNNPVL
IGEPGVGKTAVVEGLAQKIVDGDVPHKLQGKEVIRLDVVSLVQGTGIRGQFEERMQKLMEEIRKREDIILFIDEIHEIVG
AGSAGDGNMDAGNILKPALARGELQLVGATTLNEYRIIEKDAALERRMQPVKVDEPTVEETITILKGIQKKYEDYHHVHY
TDSAIEAAATLSNRYIQDRFLPDKAIDLLDEAGSKMNLTLNFVDPKVIDQRLIEAENLKAQATRDEDFEKAAYFRDQIAK
YKEMQKTKVTDQDTPIISEKTIEHIIEQKTNIPVGDLKEKEQSQLINLADDLKAHVIGQDDAVDKLAKAIRRNRVGLGTP
NRPIGSFLFVGPTGVGKTELSKQLAIELFGSADSMIRFDMSEYMEKHSVAKLVGAPPGYVGYDEAGQLTEKVRRNPYSLI
LLDEVEKAHPDVMHMFLQVLDDGRLTDGQGRTVSFKDAIIIMTSNAGTGKAEASVGFGAAREGRTNSVLGELGNFFSPEF
MNRFDGIIEFKALNKENLLQIVDLMLDDVNKRLASNNISLEVTDKVKEKLVDLGYDPKMGARPLRRTIQDNIEDAITDFY
LENPTEKELKAVMISNGKIMIKSKNKLEKVEATD
Nucleotide
Download Length: 2265 bp
>NTDB_id=1152603 NBW44_RS04995 WP_250307458.1 988220..990484(+) (clpE) [Streptococcus sp. Marseille-Q3533]
ATGCTCTGTCAAAACTGTAAAATCAATGACTCAACCATTCACCTTTATACAAATCTCAACGGAAAACAAAAGCAAATTGA
TCTTTGTCAAAACTGCTACAAAATTATTAAAACAGATCCCAATAATAGCTTATTTAAAGGGATTACGGATTTGAGTAATC
GAGATTTCGATCCATTAAGCGACTTCTTTAATGACATTAGTAATTTCCAACCTACTTCTAATAACACTCCTCCGACTCAG
TCAGGTGGAGGTTTTGGTGGCAATGGTGGCTTTGGTGGTAATGGTAGTTTTGGTTCCCCAAATCGTGGTCCAGCACAAAC
CCCTCCACCAAATAAAGAAAAAGGGCTTTTGGATGAGTATGGTATCAATGTGACAGAGATTGCTCGTCAAGGAAAGATTG
ACCCAGTTATTGGCCGTGACGAAGAAATCATTCGTGTTATTGAAATTCTCAACCGTAGAACTAAGAACAATCCTGTCCTT
ATCGGAGAACCTGGTGTCGGAAAAACTGCCGTTGTCGAAGGTCTAGCACAAAAAATAGTTGATGGGGATGTGCCGCATAA
ACTCCAAGGCAAAGAAGTTATCCGTTTGGATGTGGTGAGCCTTGTCCAAGGTACTGGTATTCGTGGTCAATTCGAAGAAC
GCATGCAAAAACTCATGGAGGAAATCCGGAAACGCGAGGATATTATCCTCTTTATCGACGAAATTCATGAAATTGTAGGT
GCTGGTTCTGCTGGAGACGGTAATATGGATGCCGGAAACATCCTCAAACCTGCCCTTGCTCGTGGCGAACTTCAACTTGT
TGGTGCTACTACTCTCAATGAATACCGCATCATTGAAAAAGATGCTGCTCTCGAACGACGCATGCAACCTGTTAAGGTTG
ATGAACCAACAGTGGAAGAAACTATTACTATCCTCAAAGGTATTCAAAAGAAATACGAAGATTATCACCACGTTCATTAT
ACAGATAGTGCTATTGAAGCTGCTGCTACTCTTTCTAATCGTTATATCCAAGATCGTTTCTTACCAGACAAAGCCATCGA
CCTTCTGGATGAAGCTGGTTCTAAAATGAACTTAACGCTAAACTTTGTTGATCCTAAGGTTATTGATCAACGCCTAATCG
AAGCCGAAAATCTCAAGGCTCAAGCTACTAGAGATGAAGACTTTGAAAAAGCCGCCTACTTCCGTGATCAGATTGCCAAA
TACAAAGAAATGCAAAAGACAAAAGTAACGGATCAGGATACTCCAATTATCAGCGAAAAAACAATTGAGCATATCATTGA
ACAAAAAACAAATATTCCGGTTGGTGACCTAAAAGAAAAAGAACAGTCTCAACTCATCAACTTAGCAGATGACCTCAAGG
CTCATGTTATTGGCCAAGACGATGCTGTTGATAAATTGGCTAAAGCTATTCGTCGTAACCGGGTTGGTCTCGGTACTCCA
AACCGTCCAATTGGCAGCTTCCTTTTCGTCGGTCCAACAGGAGTTGGTAAAACTGAACTTTCTAAACAATTGGCTATCGA
ACTCTTCGGATCAGCAGATAGCATGATTCGTTTCGATATGAGTGAATATATGGAGAAACATAGTGTTGCAAAACTAGTCG
GTGCTCCTCCAGGATATGTCGGCTATGATGAAGCAGGACAACTGACTGAAAAAGTTCGTCGCAATCCTTATTCACTTATT
CTACTAGACGAAGTAGAAAAAGCCCATCCTGATGTCATGCACATGTTTCTTCAGGTCTTAGATGACGGGCGCTTAACGGA
CGGCCAAGGGCGTACCGTTAGCTTTAAAGACGCTATCATTATTATGACCTCAAATGCTGGTACCGGTAAGGCAGAAGCAA
GTGTCGGATTTGGTGCAGCTAGAGAAGGGCGTACAAATTCGGTGCTAGGTGAACTGGGTAATTTCTTTAGCCCTGAATTC
ATGAACCGCTTCGATGGTATTATTGAGTTTAAAGCACTCAATAAAGAAAACCTCCTTCAAATCGTTGACCTTATGCTGGA
TGATGTCAACAAACGTCTTGCAAGTAACAATATCTCTTTAGAGGTTACTGATAAGGTCAAGGAAAAATTGGTCGATTTGG
GCTATGATCCAAAAATGGGAGCTCGTCCACTCCGCAGAACTATCCAAGACAATATCGAAGATGCTATTACAGACTTCTAC
CTTGAAAATCCAACTGAAAAAGAGTTGAAAGCTGTCATGATCAGCAATGGAAAAATCATGATTAAATCCAAAAACAAGCT
AGAAAAAGTTGAAGCAACTGACTAA
ATGCTCTGTCAAAACTGTAAAATCAATGACTCAACCATTCACCTTTATACAAATCTCAACGGAAAACAAAAGCAAATTGA
TCTTTGTCAAAACTGCTACAAAATTATTAAAACAGATCCCAATAATAGCTTATTTAAAGGGATTACGGATTTGAGTAATC
GAGATTTCGATCCATTAAGCGACTTCTTTAATGACATTAGTAATTTCCAACCTACTTCTAATAACACTCCTCCGACTCAG
TCAGGTGGAGGTTTTGGTGGCAATGGTGGCTTTGGTGGTAATGGTAGTTTTGGTTCCCCAAATCGTGGTCCAGCACAAAC
CCCTCCACCAAATAAAGAAAAAGGGCTTTTGGATGAGTATGGTATCAATGTGACAGAGATTGCTCGTCAAGGAAAGATTG
ACCCAGTTATTGGCCGTGACGAAGAAATCATTCGTGTTATTGAAATTCTCAACCGTAGAACTAAGAACAATCCTGTCCTT
ATCGGAGAACCTGGTGTCGGAAAAACTGCCGTTGTCGAAGGTCTAGCACAAAAAATAGTTGATGGGGATGTGCCGCATAA
ACTCCAAGGCAAAGAAGTTATCCGTTTGGATGTGGTGAGCCTTGTCCAAGGTACTGGTATTCGTGGTCAATTCGAAGAAC
GCATGCAAAAACTCATGGAGGAAATCCGGAAACGCGAGGATATTATCCTCTTTATCGACGAAATTCATGAAATTGTAGGT
GCTGGTTCTGCTGGAGACGGTAATATGGATGCCGGAAACATCCTCAAACCTGCCCTTGCTCGTGGCGAACTTCAACTTGT
TGGTGCTACTACTCTCAATGAATACCGCATCATTGAAAAAGATGCTGCTCTCGAACGACGCATGCAACCTGTTAAGGTTG
ATGAACCAACAGTGGAAGAAACTATTACTATCCTCAAAGGTATTCAAAAGAAATACGAAGATTATCACCACGTTCATTAT
ACAGATAGTGCTATTGAAGCTGCTGCTACTCTTTCTAATCGTTATATCCAAGATCGTTTCTTACCAGACAAAGCCATCGA
CCTTCTGGATGAAGCTGGTTCTAAAATGAACTTAACGCTAAACTTTGTTGATCCTAAGGTTATTGATCAACGCCTAATCG
AAGCCGAAAATCTCAAGGCTCAAGCTACTAGAGATGAAGACTTTGAAAAAGCCGCCTACTTCCGTGATCAGATTGCCAAA
TACAAAGAAATGCAAAAGACAAAAGTAACGGATCAGGATACTCCAATTATCAGCGAAAAAACAATTGAGCATATCATTGA
ACAAAAAACAAATATTCCGGTTGGTGACCTAAAAGAAAAAGAACAGTCTCAACTCATCAACTTAGCAGATGACCTCAAGG
CTCATGTTATTGGCCAAGACGATGCTGTTGATAAATTGGCTAAAGCTATTCGTCGTAACCGGGTTGGTCTCGGTACTCCA
AACCGTCCAATTGGCAGCTTCCTTTTCGTCGGTCCAACAGGAGTTGGTAAAACTGAACTTTCTAAACAATTGGCTATCGA
ACTCTTCGGATCAGCAGATAGCATGATTCGTTTCGATATGAGTGAATATATGGAGAAACATAGTGTTGCAAAACTAGTCG
GTGCTCCTCCAGGATATGTCGGCTATGATGAAGCAGGACAACTGACTGAAAAAGTTCGTCGCAATCCTTATTCACTTATT
CTACTAGACGAAGTAGAAAAAGCCCATCCTGATGTCATGCACATGTTTCTTCAGGTCTTAGATGACGGGCGCTTAACGGA
CGGCCAAGGGCGTACCGTTAGCTTTAAAGACGCTATCATTATTATGACCTCAAATGCTGGTACCGGTAAGGCAGAAGCAA
GTGTCGGATTTGGTGCAGCTAGAGAAGGGCGTACAAATTCGGTGCTAGGTGAACTGGGTAATTTCTTTAGCCCTGAATTC
ATGAACCGCTTCGATGGTATTATTGAGTTTAAAGCACTCAATAAAGAAAACCTCCTTCAAATCGTTGACCTTATGCTGGA
TGATGTCAACAAACGTCTTGCAAGTAACAATATCTCTTTAGAGGTTACTGATAAGGTCAAGGAAAAATTGGTCGATTTGG
GCTATGATCCAAAAATGGGAGCTCGTCCACTCCGCAGAACTATCCAAGACAATATCGAAGATGCTATTACAGACTTCTAC
CTTGAAAATCCAACTGAAAAAGAGTTGAAAGCTGTCATGATCAGCAATGGAAAAATCATGATTAAATCCAAAAACAAGCT
AGAAAAAGTTGAAGCAACTGACTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpE | Streptococcus pneumoniae Rx1 |
91.333 |
99.469 |
0.908 |
| clpE | Streptococcus pneumoniae D39 |
91.333 |
99.469 |
0.908 |
| clpE | Streptococcus pneumoniae R6 |
91.333 |
99.469 |
0.908 |
| clpE | Streptococcus pneumoniae TIGR4 |
91.2 |
99.469 |
0.907 |
| clpE | Streptococcus mutans UA159 |
82.252 |
100 |
0.824 |
| clpC | Lactococcus lactis subsp. cremoris KW2 |
75.623 |
100 |
0.765 |
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
51.775 |
89.655 |
0.464 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
47.076 |
88.462 |
0.416 |
| clpC | Streptococcus thermophilus LMD-9 |
47.276 |
82.759 |
0.391 |
| clpC | Streptococcus pneumoniae Rx1 |
47.343 |
82.361 |
0.39 |
| clpC | Streptococcus pneumoniae D39 |
47.343 |
82.361 |
0.39 |
| clpC | Streptococcus pneumoniae TIGR4 |
47.182 |
82.361 |
0.389 |
| clpC | Streptococcus thermophilus LMG 18311 |
46.955 |
82.759 |
0.389 |
| clpC | Streptococcus mutans UA159 |
46.73 |
83.156 |
0.389 |