Detailed information NTG1152384

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: NIU15_RS12455
• Genome accession: NZ_OW622535
• Coordinates: 2886571..2887890 (-)
• Length: 439 a.a.
• NCBI ID: WP_004195253.1
• Uniprot ID: A0AAX1X7P9
• Organism: Burkholderia mallei strain 34 isolate 34
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2881571..2892890

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NIU15_RS12440	-	2882477..2882872 (-)	396	WP_011204219.1	nitrite reductase (NAD(P)H) small subunit	-
NIU15_RS12445	nirB	2882941..2885385 (-)	2445	WP_004195264.1	nitrite reductase large subunit NirB	-
NIU15_RS12450	maiA	2885770..2886414 (+)	645	WP_004195258.1	maleylacetoacetate isomerase	-
NIU15_RS12455	pilA	2886571..2887890 (-)	1320	WP_004195253.1	signal recognition particle-docking protein FtsY	Machinery gene
NIU15_RS12460	rsmD	2888142..2888768 (+)	627	WP_004195251.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
NIU15_RS12465	coaD	2888879..2889379 (+)	501	WP_004195249.1	pantetheine-phosphate adenylyltransferase	-
NIU15_RS12470	-	2889442..2889708 (+)	267	WP_004195247.1	YfhL family 4Fe-4S dicluster ferredoxin	-
NIU15_RS12475	hisC	2889887..2890957 (-)	1071	WP_011204217.1	histidinol-phosphate transaminase	-
NIU15_RS12480	pth	2891046..2891651 (-)	606	WP_004202941.1	aminoacyl-tRNA hydrolase	-
NIU15_RS12485	-	2891765..2892379 (-)	615	WP_004200150.1	50S ribosomal protein L25/general stress protein Ctc	-

Sequence

Protein

• Length: 439 a.a.
• Molecular weight: 46404.68 Da
• Isoelectric Point: 6.0726

>NTDB_id=1152384 NIU15_RS12455 WP_004195253.1 2886571..2887890(-) (pilA) [Burkholderia mallei strain 34 isolate 34]
MFSFFKRFKKAPDAAPAEPQQAPDAPRDASRAPASPDAARVDAPAAPQPRDERSENHDRPEHDETPTAEHSRSGAQPAAR
ATPPASAAASEAPVGQPRAAAARASEPAPSVVMTVTPSSNGRHGVVETVEIVPPPAPEPAAKKSWIARLKSGLAKTSSSI
TNVFVNTKIDDALYEELETALLMSDAGIDATEHLLDALREKVRAGRLTDPQQVKDALRGLLVELLAPLEKSFVLGRAQPL
VMMIAGVNGAGKTTSIGKLAKHLQSFDQSVLLAAGDTFRAAAREQLAIWGERNNVTVVQQESGDPAAVIFDAVSAARARN
IDVMMADTAGRLPTQLHLMEELRKVKRVIGKAHDGAPHEVLLVIDANTGQNALAQVKAFDDALGLTGLIVTKLDGTAKGG
ILAAIARQRPIPVYFIGIGEKVEDLQPFSAEEFADALLG

Nucleotide

• Length: 1320 bp

>NTDB_id=1152384 NIU15_RS12455 WP_004195253.1 2886571..2887890(-) (pilA) [Burkholderia mallei strain 34 isolate 34]
ATGTTCAGTTTCTTCAAACGATTCAAGAAAGCGCCCGATGCCGCCCCGGCCGAGCCGCAGCAAGCGCCCGACGCGCCGCG
GGACGCTTCCCGCGCACCGGCATCGCCCGACGCCGCGCGAGTCGACGCGCCGGCCGCGCCGCAGCCGCGCGACGAGCGCA
GCGAAAACCACGATCGCCCCGAGCACGACGAAACGCCGACCGCCGAGCATTCCCGTTCCGGCGCGCAGCCCGCCGCGCGC
GCGACGCCGCCCGCGTCCGCCGCCGCGTCGGAAGCGCCGGTCGGGCAGCCGCGCGCCGCCGCCGCGCGCGCAAGCGAGCC
CGCGCCGTCGGTCGTGATGACGGTCACGCCGTCGTCGAACGGCCGCCACGGCGTCGTCGAGACGGTCGAGATCGTGCCGC
CGCCCGCGCCCGAGCCGGCCGCGAAGAAATCGTGGATCGCGCGGCTGAAGTCCGGCCTCGCGAAGACGAGCTCGAGCATC
ACGAACGTATTCGTCAACACGAAAATCGACGACGCGCTCTACGAGGAGCTCGAGACGGCGCTGCTGATGTCCGACGCCGG
CATCGACGCGACCGAGCATCTGCTCGACGCGCTGCGCGAAAAGGTGCGCGCGGGCCGCCTCACCGATCCGCAGCAGGTGA
AGGACGCGCTGCGCGGGCTGCTCGTCGAGCTGCTGGCGCCGCTCGAGAAGTCGTTCGTGCTCGGCCGCGCGCAGCCGCTC
GTGATGATGATCGCGGGCGTGAACGGCGCCGGCAAGACGACGAGCATCGGCAAGCTCGCGAAGCATCTGCAGAGCTTCGA
TCAATCGGTGCTGCTCGCCGCGGGCGACACGTTTCGCGCCGCCGCACGCGAGCAGCTCGCGATCTGGGGCGAACGCAACA
ACGTGACCGTCGTCCAGCAGGAAAGCGGCGACCCCGCCGCGGTGATCTTCGATGCGGTCAGCGCCGCGCGCGCGCGCAAC
ATCGACGTGATGATGGCCGACACCGCAGGCCGCCTGCCGACGCAGCTGCATCTGATGGAAGAGCTCCGGAAGGTGAAGCG
CGTGATCGGCAAGGCGCACGACGGCGCGCCGCACGAGGTGCTGCTCGTGATCGACGCGAACACCGGCCAGAACGCGCTCG
CGCAGGTAAAGGCGTTCGACGACGCGCTCGGCCTCACGGGCCTCATCGTCACGAAGCTCGACGGCACCGCGAAGGGCGGC
ATCCTCGCCGCGATCGCGCGCCAGCGGCCGATTCCGGTGTACTTCATCGGCATCGGCGAGAAGGTCGAGGATCTGCAGCC
GTTCAGCGCGGAGGAATTCGCGGACGCGCTGCTCGGCTAG

Domains

Predicted by InterproScan.

• SRP54-type protein, helical bundle domain (SRP54_N) (158-218)

• SRP54-type protein, GTPase domain (SRP54) (240-439)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	49.887	100	0.503