Detailed information NTG1152280

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: OC617_RS01075
• Genome accession: NZ_OW443147
• Coordinates: 231594..232601 (+)
• Length: 335 a.a.
• NCBI ID: WP_000224452.1
• Uniprot ID: A0A085RG68
• Organism: Vibrio cholerae strain CNRVC190243 isolate YE-NCPHL-19014-PI
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 226594..237601

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OC617_RS01055 (CNRVC190243H_00209)	metJ	226598..226915 (+)	318	WP_000796267.1	met regulon transcriptional regulator MetJ	-
OC617_RS01060 (CNRVC190243H_00210)	-	227026..228303 (-)	1278	WP_001278588.1	malic enzyme-like NAD(P)-binding protein	-
OC617_RS01065 (CNRVC190243H_00211)	rpmE	228611..228829 (-)	219	WP_000643446.1	50S ribosomal protein L31	-
OC617_RS01070 (CNRVC190243H_00212)	priA	229084..231288 (+)	2205	WP_001247858.1	primosomal protein N'	-
OC617_RS01075 (CNRVC190243H_00213)	cytR	231594..232601 (+)	1008	WP_000224452.1	DNA-binding transcriptional regulator CytR	Regulator
OC617_RS01080 (CNRVC190243H_00214)	-	232773..233324 (+)	552	WP_001884022.1	SPOR domain-containing protein	-
OC617_RS01085 (CNRVC190243H_00215)	hslV	233461..234018 (+)	558	WP_000208249.1	ATP-dependent protease subunit HslV	-
OC617_RS01090 (CNRVC190243H_00216)	hslU	234084..235415 (+)	1332	WP_001293370.1	HslU--HslV peptidase ATPase subunit	-
OC617_RS01095 (CNRVC190243H_00217)	-	235519..236436 (+)	918	WP_001066162.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
OC617_RS01100 (CNRVC190243H_00218)	rraA	236511..237026 (+)	516	WP_000456236.1	ribonuclease E activity regulator RraA	-

Sequence

Protein

• Length: 335 a.a.
• Molecular weight: 37018.59 Da
• Isoelectric Point: 7.0759

>NTDB_id=1152280 OC617_RS01075 WP_000224452.1 231594..232601(+) (cytR) [Vibrio cholerae strain CNRVC190243 isolate YE-NCPHL-19014-PI]
MATMKDVAQLAGVSTATVSRALMNPEKVSSSTRKRVEEAVLEAGYSPNSLARNLRRNESKTIVAIVPDICDPYFSEIIRG
IEDAAMEHGYLVLLGDSGQQKRRENSFVNLVFTKQADGMLLLGTDLPFDVSKPEQKNLPPMVMACEFAPELELPTVHIDN
LTSAFEAVNYLTQLGHKRIAQISGPQHAALCQFRHQGYQQALRRAGITMNPTYCTFGDFTFEAGAKAVRQLLALPEQPTA
IFCHNDTMAIGAIQEAKRLGLRVPQDLSVVGFDDIQFAQYCDPPLTTISQPRYEIGRQAMLMMLELLRGHDVRAGSRLLE
TKLVVRESAAPPSKK

Nucleotide

• Length: 1008 bp

>NTDB_id=1152280 OC617_RS01075 WP_000224452.1 231594..232601(+) (cytR) [Vibrio cholerae strain CNRVC190243 isolate YE-NCPHL-19014-PI]
ATGGCGACAATGAAGGATGTTGCCCAGCTTGCTGGAGTTTCAACCGCGACCGTGTCTCGTGCGTTGATGAATCCAGAGAA
AGTCTCGTCGTCCACTCGTAAACGAGTGGAAGAGGCCGTGCTGGAAGCGGGTTACTCACCCAATTCTTTGGCGCGCAATT
TGCGCCGTAATGAATCGAAAACCATCGTTGCTATCGTGCCAGATATCTGTGATCCCTACTTTTCTGAGATCATTCGCGGT
ATTGAAGATGCCGCGATGGAGCACGGTTATCTGGTGCTGTTGGGGGATAGTGGTCAACAGAAGCGTCGGGAGAACTCGTT
CGTTAATCTGGTGTTTACCAAACAGGCAGACGGTATGTTGCTGCTGGGGACAGATTTGCCGTTTGATGTGAGTAAACCTG
AGCAGAAAAACCTACCGCCTATGGTGATGGCGTGTGAATTTGCGCCAGAGCTGGAATTGCCAACGGTACACATTGATAAC
CTGACCTCGGCATTTGAGGCGGTAAACTATCTCACTCAGCTTGGGCACAAACGGATTGCGCAGATCTCAGGTCCACAACA
TGCTGCGCTGTGCCAATTCCGTCATCAAGGCTATCAACAGGCGTTGCGTCGTGCTGGCATCACCATGAACCCGACTTACT
GCACTTTTGGCGATTTCACTTTTGAAGCCGGGGCAAAAGCGGTGCGTCAGCTGTTGGCATTGCCTGAGCAGCCGACCGCG
ATTTTCTGTCATAACGATACGATGGCGATTGGCGCAATTCAGGAAGCGAAGCGACTTGGCTTGCGCGTACCGCAAGATCT
CTCTGTGGTCGGTTTTGACGATATTCAGTTTGCCCAGTACTGCGATCCCCCATTAACCACCATTTCGCAGCCGCGTTATG
AGATTGGCCGTCAAGCCATGCTGATGATGCTTGAGCTGCTTCGCGGACACGATGTACGTGCTGGATCGCGTCTTTTGGAG
ACCAAGCTGGTCGTGCGTGAGAGTGCTGCGCCGCCAAGCAAGAAGTAA

Domains

Predicted by InterproScan.

• Bacterial regulatory proteins, lacI family (LacI) (3-48)

• Periplasmic binding protein-like domain (Peripla_BP_3) (168-328)

3D structure

• AlphaFold DB: A0A085RG68

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio cholerae C6706	100	100	1
cytR	Vibrio parahaemolyticus RIMD 2210633	90.719	99.701	0.904