Detailed information NTG1152198

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: QM552_RS08950
• Genome accession: NZ_OW011623
• Coordinates: 1966139..1967398 (+)
• Length: 419 a.a.
• NCBI ID: WP_004264506.1
• Uniprot ID: -
• Organism: Thauera humireducens strain Piv1
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1961139..1972398

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QM552_RS08925 (C4PIVTH_1863)	-	1961906..1962157 (-)	252	WP_282810052.1	YfhL family 4Fe-4S dicluster ferredoxin	-
QM552_RS08930 (C4PIVTH_1864)	coaD	1962174..1962665 (-)	492	WP_048706462.1	pantetheine-phosphate adenylyltransferase	-
QM552_RS08935 (C4PIVTH_1865)	rsmD	1962662..1963201 (-)	540	WP_004264121.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
QM552_RS08940 (C4PIVTH_1866)	-	1963198..1964562 (-)	1365	WP_282810053.1	pitrilysin family protein	-
QM552_RS08945 (C4PIVTH_1867)	-	1964594..1965976 (-)	1383	WP_282810054.1	pitrilysin family protein	-
QM552_RS08950 (C4PIVTH_1868)	pilA	1966139..1967398 (+)	1260	WP_004264506.1	signal recognition particle-docking protein FtsY	Machinery gene
QM552_RS08955 (C4PIVTH_1869)	-	1967395..1968090 (+)	696	WP_282810055.1	cell division ATP-binding protein FtsE	-
QM552_RS08960 (C4PIVTH_1870)	ftsX	1968087..1968983 (+)	897	WP_004264503.1	permease-like cell division protein FtsX	-
QM552_RS08965 (C4PIVTH_1871)	ahpC	1969190..1969753 (+)	564	WP_048706452.1	alkyl hydroperoxide reductase subunit C	-
QM552_RS08970 (C4PIVTH_1872)	ahpF	1969883..1971448 (+)	1566	WP_282810056.1	alkyl hydroperoxide reductase subunit F	-

Sequence

Protein

• Length: 419 a.a.
• Molecular weight: 43854.35 Da
• Isoelectric Point: 4.9019

>NTDB_id=1152198 QM552_RS08950 WP_004264506.1 1966139..1967398(+) (pilA) [Thauera humireducens strain Piv1]
MFGFLKKKFGKNEQAESAPPSAEEIVQPQATDVVAPAVEAPAAAESVAVVEQVAVDAVPPAGQVPQAEAPVEAIQPAVVP
DEPVAPVLVAAVVTPPAVAEAPVKRSWTDRLKAGLARTRQQLGGGLASLFGLRKIDEELLEELESTLLMADCGVEATQHL
IDDLRLRWKRDRLETADQLQQALADGLHGIIAPLEQPLDIAGHQPFIIMIAGVNGSGKTTSIGKLAKYFQAQGKSVLLAA
GDTFRAAAREQLMTWGERNNVTVVAQDGGDAAAVIFDAISAARARGIDVVLADTAGRLPTQLHLMEEIAKVRRVIAKADA
SGPHEVLLVLDANIGQNALAQVKAFDKAIGVTGLVVTKLDGTAKGGVLAAIARQCPKPLRFIGVGEGIDDLQPFKAREFV
DALFEPGAAAVKSGAGERA

Nucleotide

• Length: 1260 bp

>NTDB_id=1152198 QM552_RS08950 WP_004264506.1 1966139..1967398(+) (pilA) [Thauera humireducens strain Piv1]
ATGTTTGGTTTCCTGAAGAAGAAGTTCGGCAAGAACGAGCAGGCCGAATCGGCCCCGCCATCGGCCGAAGAAATCGTCCA
GCCGCAGGCGACCGATGTCGTCGCGCCGGCTGTCGAGGCGCCCGCCGCTGCCGAGTCCGTGGCGGTGGTCGAGCAGGTCG
CAGTCGATGCCGTTCCGCCTGCCGGGCAGGTGCCTCAGGCGGAAGCACCTGTCGAAGCGATCCAGCCGGCCGTCGTGCCG
GACGAGCCCGTTGCGCCGGTGCTGGTCGCCGCCGTGGTCACCCCTCCGGCGGTGGCCGAGGCGCCGGTGAAGCGCTCCTG
GACCGATCGTCTCAAGGCGGGCCTGGCACGCACCCGCCAGCAACTGGGGGGCGGCCTCGCCAGCCTGTTCGGCCTGCGCA
AGATCGACGAGGAACTGCTCGAGGAACTGGAGTCGACGCTGCTGATGGCCGACTGCGGCGTCGAGGCCACCCAGCACCTG
ATCGACGACCTGCGCCTGCGCTGGAAGCGCGACCGGCTCGAGACCGCCGACCAGTTGCAGCAGGCACTCGCCGACGGGCT
GCACGGCATCATCGCGCCGCTGGAACAGCCGCTGGACATCGCGGGCCACCAGCCCTTCATCATCATGATCGCGGGCGTCA
ACGGCTCGGGCAAGACGACCTCCATCGGCAAGCTCGCCAAGTATTTCCAGGCCCAGGGCAAGAGCGTGCTGCTGGCTGCG
GGCGACACCTTCCGCGCGGCGGCGCGCGAGCAGCTGATGACCTGGGGCGAGCGCAACAACGTCACCGTCGTGGCGCAGGA
CGGCGGTGATGCCGCGGCGGTGATCTTCGACGCGATCAGCGCTGCGCGCGCGCGCGGAATCGACGTCGTGCTCGCCGACA
CCGCCGGCCGTTTGCCGACCCAGCTTCATCTGATGGAAGAGATCGCCAAGGTCCGGCGGGTGATCGCCAAGGCCGATGCG
TCCGGCCCGCACGAGGTGCTGCTGGTGCTCGACGCCAACATCGGGCAGAACGCGCTGGCGCAGGTGAAGGCTTTCGACAA
GGCGATCGGGGTGACCGGCCTGGTGGTGACCAAGCTCGACGGCACCGCCAAGGGCGGCGTGCTGGCCGCGATCGCGCGCC
AGTGTCCCAAGCCGCTGCGCTTCATCGGCGTGGGCGAGGGCATCGACGACCTGCAGCCGTTCAAGGCGCGTGAATTCGTC
GATGCGCTGTTCGAGCCCGGTGCGGCGGCGGTGAAGAGCGGAGCGGGCGAACGCGCATGA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (206-404)

• SRP54-type protein, helical bundle domain (SRP54_N) (122-186)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	54.245	100	0.549