Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   QM552_RS08540 Genome accession   NZ_OW011623
Coordinates   1887107..1887496 (-) Length   129 a.a.
NCBI ID   WP_004291748.1    Uniprot ID   A0A127K6Y0
Organism   Thauera humireducens strain Piv1     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 1882107..1892496
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QM552_RS08525 (C4PIVTH_1778) - 1884005..1886143 (-) 2139 WP_282810019.1 methyl-accepting chemotaxis protein -
  QM552_RS08530 (C4PIVTH_1779) - 1886198..1886707 (-) 510 WP_282810020.1 chemotaxis protein CheW -
  QM552_RS08535 (C4PIVTH_1780) - 1886715..1887080 (-) 366 WP_004291750.1 PleD family two-component system response regulator -
  QM552_RS08540 (C4PIVTH_1781) pilG 1887107..1887496 (-) 390 WP_004291748.1 PleD family two-component system response regulator Regulator
  QM552_RS08545 (C4PIVTH_1782) - 1887578..1887730 (-) 153 WP_004291746.1 rubredoxin -
  QM552_RS08550 (C4PIVTH_1783) - 1887845..1888702 (+) 858 WP_048706596.1 PfkB family carbohydrate kinase -
  QM552_RS08555 (C4PIVTH_1784) thiE 1888707..1889345 (+) 639 WP_282810021.1 thiamine phosphate synthase -
  QM552_RS08560 (C4PIVTH_1785) hemL 1889452..1890735 (+) 1284 WP_282810022.1 glutamate-1-semialdehyde 2,1-aminomutase -

Sequence

Protein


Download         Length: 129 a.a.        Molecular weight: 14118.29 Da        Isoelectric Point: 7.1342

>NTDB_id=1152197 QM552_RS08540 WP_004291748.1 1887107..1887496(-) (pilG) [Thauera humireducens strain Piv1]
MDLAGLKVMVIDDSNTIRRSAEIFLGQSGCQVLLAEDGFDALAKIADHNPDVIFVDIMMPRLDGYQTCALIKKNPRLAST
PVIMLSSRDGLFDRARGRMVGSDEYLTKPFTKDSLLKAVAQHSGRSSTT

Nucleotide


Download         Length: 390 bp        

>NTDB_id=1152197 QM552_RS08540 WP_004291748.1 1887107..1887496(-) (pilG) [Thauera humireducens strain Piv1]
ATGGACCTTGCCGGACTGAAGGTGATGGTCATCGATGACAGCAACACGATTCGCCGCAGCGCAGAGATCTTTCTCGGCCA
GTCCGGCTGTCAGGTGCTGCTCGCCGAGGATGGCTTCGACGCCCTGGCGAAGATCGCCGACCACAACCCCGACGTGATCT
TCGTCGACATCATGATGCCGCGGCTGGACGGCTACCAGACCTGCGCCCTGATCAAGAAAAACCCGCGGCTGGCCTCGACC
CCCGTGATCATGCTGTCATCGCGCGACGGGCTGTTCGATCGCGCGCGCGGCCGCATGGTGGGTTCGGACGAATACCTCAC
CAAGCCTTTCACCAAGGACAGCCTGCTGAAGGCCGTTGCCCAACACTCCGGTCGCAGCAGCACCACCTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(8-119)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A127K6Y0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

68.333

93.023

0.636

Multiple sequence alignment