Detailed information NTG1151585

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: MKZ32_RS12255
• Genome accession: NZ_OU912926
• Coordinates: 2684893..2685867 (-)
• Length: 324 a.a.
• NCBI ID: WP_239798155.1
• Uniprot ID: -
• Organism: Candidatus Nitrotoga arctica strain 6680 isolate 6680
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2679893..2690867

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MKZ32_RS12235 (NTG6680_2546)	-	2680222..2681850 (+)	1629	WP_239797521.1	hypothetical protein	-
MKZ32_RS12240 (NTG6680_2547)	-	2681927..2683138 (-)	1212	WP_239797522.1	trypsin-like peptidase domain-containing protein	-
MKZ32_RS12245 (NTG6680_2548)	ftsX	2683338..2684246 (-)	909	WP_239797523.1	permease-like cell division protein FtsX	-
MKZ32_RS12250 (NTG6680_2549)	ftsE	2684243..2684896 (-)	654	WP_239797524.1	cell division ATP-binding protein FtsE	-
MKZ32_RS12255 (NTG6680_2550)	pilA	2684893..2685867 (-)	975	WP_239798155.1	signal recognition particle-docking protein FtsY	Machinery gene
MKZ32_RS12260 (NTG6680_2551)	-	2686042..2687373 (+)	1332	WP_239797525.1	M16 family metallopeptidase	-
MKZ32_RS12265 (NTG6680_2552)	-	2687363..2688703 (+)	1341	WP_239797526.1	M16 family metallopeptidase	-
MKZ32_RS12270 (NTG6680_2553)	rsmD	2688718..2689242 (+)	525	WP_320412282.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
MKZ32_RS12275 (NTG6680_2554)	coaD	2689245..2689721 (+)	477	WP_239797528.1	pantetheine-phosphate adenylyltransferase	-
MKZ32_RS12280 (NTG6680_2555)	-	2689738..2689995 (+)	258	WP_239797529.1	YfhL family 4Fe-4S dicluster ferredoxin	-

Sequence

Protein

• Length: 324 a.a.
• Molecular weight: 34699.37 Da
• Isoelectric Point: 7.3250

>NTDB_id=1151585 MKZ32_RS12255 WP_239798155.1 2684893..2685867(-) (pilA) [Candidatus Nitrotoga arctica strain 6680 isolate 6680]
MFGFLKKIPIESKSNPVEDTPKKSGWISRLKCGLARTADQMSDLFGRGGKIDDDLYEELETILITADVGMDATRFLLAEL
RRQVKVQRLTEAVQLKEALAYDLIKLLKPLAQPLETGLHNPCVIMLAGVNGAGKTTSIGKLAKYFQGQGKSVLLAAGDTF
RAAAREQLMEWGARNNVTVIAQQSGDAAAVIFDAVQAAQARKIDIVLADTAGRLSTQIHLMEEIKKVKRVIAKALPGAPH
EVLLVLDANTGQNALSQVKAFDDALAVTGLILTKLDGTAKGGVIAAIAKAHPIPLRFIGVGEGLDDLRPFVAEDFVAALL
GLDE

Nucleotide

• Length: 975 bp

>NTDB_id=1151585 MKZ32_RS12255 WP_239798155.1 2684893..2685867(-) (pilA) [Candidatus Nitrotoga arctica strain 6680 isolate 6680]
ATGTTCGGCTTCCTAAAAAAAATTCCAATTGAAAGCAAGTCCAACCCGGTCGAAGACACGCCTAAAAAAAGCGGCTGGAT
CAGCCGACTTAAGTGCGGGCTGGCGCGCACTGCCGATCAAATGTCCGATTTGTTTGGCCGAGGCGGCAAGATCGACGACG
ATCTGTATGAGGAGCTGGAAACCATTCTGATTACCGCAGATGTCGGAATGGACGCAACCCGTTTCTTGCTGGCCGAGTTG
CGCCGACAAGTCAAAGTGCAGCGACTCACTGAAGCAGTTCAGCTAAAGGAGGCGTTGGCGTACGACCTGATTAAACTGCT
CAAGCCACTGGCTCAGCCTTTGGAAACGGGCTTACATAATCCCTGCGTCATTATGCTGGCCGGGGTAAACGGCGCTGGCA
AAACAACCTCCATTGGCAAGCTGGCGAAGTATTTTCAAGGGCAAGGCAAATCAGTACTGCTGGCCGCAGGCGATACCTTC
CGTGCCGCTGCGCGTGAACAGTTGATGGAGTGGGGCGCGCGCAACAATGTTACCGTCATCGCCCAGCAGAGCGGCGATGC
CGCAGCGGTGATTTTCGATGCTGTGCAAGCAGCCCAAGCACGAAAAATCGACATCGTGCTGGCCGATACTGCCGGACGTC
TGTCTACCCAGATCCATTTGATGGAAGAAATTAAAAAGGTCAAGCGCGTTATCGCCAAGGCGTTACCCGGTGCACCCCAT
GAAGTGCTGCTGGTACTGGACGCAAACACTGGCCAGAACGCGCTAAGCCAAGTCAAGGCATTTGACGATGCGCTGGCTGT
CACGGGACTGATACTGACCAAGCTGGATGGTACTGCCAAAGGCGGCGTAATTGCTGCCATCGCCAAGGCGCATCCTATTC
CCCTGCGCTTTATTGGCGTGGGAGAAGGGCTGGATGACCTGCGCCCATTTGTAGCGGAAGACTTCGTCGCGGCACTTCTG
GGACTGGACGAATGA

Domains

Predicted by InterproScan.

• SRP54-type protein, helical bundle domain (SRP54_N) (40-100)

• SRP54-type protein, GTPase domain (SRP54) (122-321)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	67.869	94.136	0.639