Detailed information NTG1151303

Bioinformatically predicted

Overview

• Name: waaF
• Type: Regulator
• Locus tag: P3C28_RS06340
• Genome accession: NZ_OU532558
• Coordinates: 1206329..1207288 (+)
• Length: 319 a.a.
• NCBI ID: WP_002935343.1
• Uniprot ID: -
• Organism: Campylobacter jejuni isolate
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 1201329..1212288

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
P3C28_RS06310 (CJ121364_001229)	neuC	1201920..1203044 (+)	1125	WP_002859249.1	UDP-N-acetylglucosamine 2-epimerase	-
P3C28_RS06315 (CJ121364_001230)	-	1203037..1203579 (+)	543	Protein_1223	beta-1,4-N-acetylgalactosaminyltransferase	-
P3C28_RS06320 (CJ121364_001231)	-	1203651..1203983 (+)	333	WP_019260376.1	hypothetical protein	-
P3C28_RS06325 (CJ121364_001232)	-	1203980..1204645 (+)	666	WP_032585167.1	acylneuraminate cytidylyltransferase family protein	-
P3C28_RS06330 (CJ121364_001233)	-	1204769..1205518 (+)	750	WP_052775749.1	CatB-related O-acetyltransferase	-
P3C28_RS06335 (CJ121364_001234)	waaV	1205458..1206270 (-)	813	WP_002935342.1	glycosyltransferase family 2 protein	-
P3C28_RS06340 (CJ121364_001235)	waaF	1206329..1207288 (+)	960	WP_002935343.1	lipopolysaccharide heptosyltransferase II	Regulator
P3C28_RS06345 (CJ121364_001236)	gmhA	1207269..1207829 (-)	561	WP_032585170.1	D-sedoheptulose 7-phosphate isomerase	-
P3C28_RS06350 (CJ121364_001237)	rfaE1	1207826..1209211 (-)	1386	WP_002935344.1	D-glycero-beta-D-manno-heptose-7-phosphate kinase	-
P3C28_RS06355 (CJ121364_001238)	rfaD	1209204..1210157 (-)	954	WP_032585172.1	ADP-glyceromanno-heptose 6-epimerase	-
P3C28_RS06360 (CJ121364_001239)	gmhB	1210158..1210719 (-)	562	Protein_1232	D-glycero-alpha-D-manno-heptose-1,7-bisphosphate 7-phosphatase	-
P3C28_RS06365 (CJ121364_001240)	-	1210800..1211102 (+)	303	WP_220549721.1	cytochrome c	-
P3C28_RS06370 (CJ121364_001241)	ccoS	1211125..1211331 (-)	207	WP_002852798.1	cbb3-type cytochrome oxidase assembly protein CcoS	-

Sequence

Protein

• Length: 319 a.a.
• Molecular weight: 36740.45 Da
• Isoelectric Point: 10.3627

>NTDB_id=1151303 P3C28_RS06340 WP_002935343.1 1206329..1207288(+) (waaF) [Campylobacter jejuni isolate]
MKIFIHLPTWLGDAVMASLALYAIKEHFKNAQFILYGSLVSTALFKEFPNSKIIIENKLSRYKQALSLRKELGKIDFSFA
FRSAFSSKIILHILKTKQRYFFDKNKHKEEHQVLKYLYFIENSLSIKAHFKDLKLPFKLKFQNPLVLKNGKKILGLNPGA
SFGSAKRWDASYFAKVALNFSQSHEILIFGAGKVEQELCNEIYQILKEQNIKVKNLCNKTTIKTLCQNIAFCDLFITNDS
GPMHLSAVYKVKTVAIFGPTKFTQTSPWQNQNAKLVHLDLACMPCMQKICPLKHHKCMKDLKPQRVIEEARNLLKNPHL

Nucleotide

• Length: 960 bp

>NTDB_id=1151303 P3C28_RS06340 WP_002935343.1 1206329..1207288(+) (waaF) [Campylobacter jejuni isolate]
ATGAAAATTTTTATACATCTTCCCACTTGGCTAGGCGATGCAGTGATGGCTTCACTTGCTTTATACGCTATAAAAGAACA
TTTTAAAAATGCTCAATTTATCCTTTATGGATCTTTGGTTTCCACAGCACTTTTTAAAGAATTTCCTAATTCTAAAATCA
TCATAGAAAATAAACTATCCCGTTATAAACAAGCTCTATCTTTACGCAAAGAACTTGGTAAGATCGATTTTAGCTTTGCT
TTTAGATCTGCGTTTTCTTCTAAGATTATCTTACATATTCTTAAAACAAAACAAAGATATTTTTTTGACAAAAACAAGCA
CAAAGAAGAACATCAAGTTTTAAAATACCTTTATTTTATAGAAAACTCACTTAGTATAAAAGCTCATTTTAAAGACTTAA
AGCTTCCCTTTAAGCTAAAATTTCAAAACCCTCTTGTCTTAAAAAATGGCAAAAAAATTCTAGGACTCAACCCTGGCGCA
AGCTTTGGAAGTGCAAAAAGATGGGATGCGAGTTATTTTGCTAAAGTAGCTTTAAATTTCAGCCAAAGTCATGAGATTTT
AATCTTTGGTGCAGGAAAAGTCGAACAAGAACTTTGTAATGAAATTTATCAAATTTTAAAAGAACAAAACATAAAAGTAA
AAAATCTTTGCAATAAAACCACCATCAAAACCCTTTGTCAAAATATTGCTTTTTGTGATCTTTTCATAACAAATGACAGT
GGTCCTATGCACCTAAGTGCGGTTTATAAGGTAAAAACCGTGGCTATTTTTGGCCCTACGAAATTTACTCAAACTTCACC
TTGGCAAAATCAAAACGCAAAATTAGTACACTTAGATCTAGCTTGTATGCCTTGTATGCAAAAAATCTGCCCTTTAAAAC
ACCACAAATGCATGAAAGATTTAAAGCCTCAAAGGGTTATAGAAGAAGCTAGAAATTTACTTAAAAACCCTCATCTATAA

Domains

Predicted by InterproScan.

• Glycosyltransferase family 9 (heptosyltransferase) (Glyco_transf_9) (96-294)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
waaF	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	94.357	100	0.944